Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RNU2-55P-201ENST00000411146 174 ntBASIC-0.54□□□□□ -2.5
UPK2O00526 AL731563.1-201ENST00000442202 214 ntBASIC-0.54□□□□□ -2.5
UPK2O00526 RNU6-976P-201ENST00000516086 111 ntBASIC-0.54□□□□□ -2.5
UPK2O00526 RNU6-175P-201ENST00000516896 107 ntBASIC-0.54□□□□□ -2.5
UPK2O00526 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.54□□□□□ -2.5
UPK2O00526 AC097639.2-201ENST00000603159 172 ntBASIC-0.54□□□□□ -2.5
UPK2O00526 AL132765.2-201ENST00000610812 351 ntBASIC-0.54□□□□□ -2.5
UPK2O00526 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 AC006210.1-201ENST00000424882 111 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 SNORD19B-201ENST00000459623 84 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.55□□□□□ -2.5
UPK2O00526 MIR5688-201ENST00000580619 83 ntBASIC-0.55□□□□□ -2.5
UPK2O00526 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 MIR1302-11-201ENST00000408051 138 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 MIR1302-9-201ENST00000408365 138 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 SNORD75.1-201ENST00000408373 60 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 MIR1302-10-201ENST00000408734 138 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 RNU6-121P-201ENST00000410525 99 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 MTND4LP11-201ENST00000422184 280 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.56□□□□□ -2.5
UPK2O00526 RNU7-70P-201ENST00000516941 66 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.56□□□□□ -2.5
UPK2O00526 AL356055.1-201ENST00000602528 446 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 MIR1302-2-201ENST00000607096 138 ntBASIC-0.56□□□□□ -2.5
UPK2O00526 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 RNY1P2-201ENST00000364820 117 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 RNU6-211P-201ENST00000384047 107 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 MIR9-2-201ENST00000384838 87 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 AL603914.1-201ENST00000401964 204 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.57□□□□□ -2.5
UPK2O00526 AC093423.1-201ENST00000440817 142 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 SNORA27.4-201ENST00000516650 95 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 RNU6-453P-201ENST00000516819 85 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 RNU7-188P-201ENST00000517063 64 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 MIR3920-201ENST00000581751 86 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 AP001180.6-201ENST00000584918 159 ntBASIC-0.57□□□□□ -2.5
UPK2O00526 RNA5SP98-201ENST00000363158 137 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 RNU6-450P-201ENST00000364654 107 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 MIR539-201ENST00000365690 78 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 RNU6-449P-201ENST00000383914 107 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 SNORA53-201ENST00000391141 249 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 AL606845.1-201ENST00000404881 255 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 RNU6-735P-201ENST00000410612 107 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 RNU7-35P-201ENST00000517174 62 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 RNA5SP66-201ENST00000517178 101 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 AC037487.3-201ENST00000606668 112 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 AC090574.1-201ENST00000623186 233 ntBASIC-0.58□□□□□ -2.5
UPK2O00526 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.58□□□□□ -2.5
UPK2O00526 RNU6-326P-201ENST00000365480 107 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 MTND4LP30-201ENST00000454092 297 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
UPK2O00526 MIR4280-201ENST00000582178 76 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 MIR7111-201ENST00000619751 72 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 U4.1-201ENST00000620349 87 ntBASIC-0.59□□□□□ -2.5
UPK2O00526 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 RNU4-70P-201ENST00000384579 139 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
UPK2O00526 SNORA3B-201ENST00000391305 131 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 AC138393.2-201ENST00000414742 246 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 TRAJ51-201ENST00000504127 63 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 MIR548AG2-201ENST00000581228 64 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 MIR548AE1-201ENST00000583292 70 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 AC145423.2-201ENST00000610631 239 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 AC105081.1-201ENST00000617727 106 ntBASIC-0.6□□□□□ -2.51
UPK2O00526 RNU6-509P-201ENST00000363519 107 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 RNU1-141P-201ENST00000364623 158 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 SNORA32-201ENST00000384072 121 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 RNY3P5-201ENST00000384127 102 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 MIR181B2-201ENST00000385004 89 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 RNU6-561P-201ENST00000516222 102 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 AL359881.1-201ENST00000602916 267 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 U6atac.1-201ENST00000616025 117 ntBASIC-0.61□□□□□ -2.51
UPK2O00526 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
UPK2O00526 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.62□□□□□ -2.51
UPK2O00526 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.62□□□□□ -2.51
UPK2O00526 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms