Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 Y_RNA.697-201ENST00000516776 113 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 SCARNA15-202ENST00000516881 127 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 RNA5SP47-201ENST00000517230 109 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 MTND5P34-201ENST00000568888 325 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 Y_RNA.262-201ENST00000364641 102 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 RNU4-16P-201ENST00000364737 141 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 RNY1P13-201ENST00000365030 105 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.483-201ENST00000384380 101 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 RNU6-535P-201ENST00000384722 107 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 MT-TW-201ENST00000387382 68 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 AL121914.1-201ENST00000450188 156 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 SNORA25.16-201ENST00000516741 121 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
DDX39AO00148 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
DDX39AO00148 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
DDX39AO00148 SNORD28-201ENST00000384706 75 ntBASIC0□□□□□ -2.41
DDX39AO00148 MIR1302-6-201ENST00000408466 90 ntBASIC0□□□□□ -2.41
DDX39AO00148 RNU6-1086P-201ENST00000410930 100 ntBASIC0□□□□□ -2.41
DDX39AO00148 RNU5E-9P-201ENST00000411164 104 ntBASIC0□□□□□ -2.41
DDX39AO00148 RNU6-635P-201ENST00000516651 102 ntBASIC0□□□□□ -2.41
DDX39AO00148 RNU6-1149P-201ENST00000516810 97 ntBASIC0□□□□□ -2.41
DDX39AO00148 Y_RNA.701-201ENST00000516812 110 ntBASIC0□□□□□ -2.41
DDX39AO00148 MIR378D2-201ENST00000580636 98 ntBASIC0□□□□□ -2.41
DDX39AO00148 MIR4744-201ENST00000581563 82 ntBASIC0□□□□□ -2.41
DDX39AO00148 MIR4639-201ENST00000584938 69 ntBASIC0□□□□□ -2.41
DDX39AO00148 MIR8062-201ENST00000621515 85 ntBASIC0□□□□□ -2.41
DDX39AO00148 AC091304.10-201ENST00000641554 121 ntBASIC0□□□□□ -2.41
DDX39AO00148 MIR411-201ENST00000362239 96 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 RNU6-893P-201ENST00000458841 100 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 MTATP8P1-201ENST00000467115 207 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 MIR4643-201ENST00000577473 78 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 AC044792.1-201ENST00000593294 196 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 AC011921.3-201ENST00000605540 361 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 U6.104-201ENST00000637979 90 ntBASIC-0.01□□□□□ -2.41
DDX39AO00148 RNU6-797P-201ENST00000363101 109 ntBASIC-0.02□□□□□ -2.41
DDX39AO00148 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.02□□□□□ -2.41
DDX39AO00148 MIR624-201ENST00000385217 97 ntBASIC-0.02□□□□□ -2.41
DDX39AO00148 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.02□□□□□ -2.41
DDX39AO00148 MTND5P32-201ENST00000560711 1802 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 RNU6-238P-201ENST00000363313 106 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 RNA5SP285-201ENST00000516619 119 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 AC244669.1-204ENST00000621564 178 ntBASIC-0.03□□□□□ -2.41
DDX39AO00148 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 MIR329-2-201ENST00000385029 84 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-578P-201ENST00000390980 103 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-848P-201ENST00000515948 107 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU7-79P-201ENST00000516082 62 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-617P-201ENST00000516147 107 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-473P-201ENST00000516164 107 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 DEFB131E-201ENST00000532329 154 ntBASIC-0.04□□□□□ -2.42
DDX39AO00148 RNA5SP245-201ENST00000364239 121 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 RNU6-472P-201ENST00000384299 107 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 MIR760-201ENST00000390220 80 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 RNU7-129P-201ENST00000516128 62 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 RNY3P16-201ENST00000516338 101 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 RNU6-531P-201ENST00000516694 104 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 AC067863.3-201ENST00000624172 122 ntBASIC-0.05□□□□□ -2.42
DDX39AO00148 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 RNY1P6-201ENST00000384193 109 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 RNU7-35P-201ENST00000517174 62 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 AP003072.1-201ENST00000531740 145 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 RNU2-4P-201ENST00000606190 192 ntBASIC-0.06□□□□□ -2.42
DDX39AO00148 SNORD114-5-201ENST00000362928 70 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 RNU4-58P-201ENST00000363192 141 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 RNA5SP133-201ENST00000363368 119 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 RNU6-643P-201ENST00000384018 107 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
DDX39AO00148 RNA5SP144-201ENST00000410846 116 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
DDX39AO00148 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms