Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AC020661.2-201ENST00000560114 134 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 RNA5SP245-201ENST00000364239 121 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 MIR1197-201ENST00000408818 88 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-985P-201ENST00000410182 104 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 AL117351.2-201ENST00000513571 157 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-531P-201ENST00000516694 104 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 MIR5190-201ENST00000581537 80 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 MIR6779-201ENST00000617283 64 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 SNORA63.5-201ENST00000363548 123 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 RNU7-79P-201ENST00000516082 62 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 MIR4305-201ENST00000583252 102 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 AL109933.3-201ENST00000619095 188 ntBASIC-0.1□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.11□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.11□□□□□ -2.43
TRAV39A0A0B4J263 SNORD116-25-201ENST00000516517 92 ntBASIC-0.11□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.11□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-238P-201ENST00000363313 106 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNA5SP133-201ENST00000363368 119 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNA5SP128-201ENST00000365305 116 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 SNORA2A-201ENST00000383885 135 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNU4-70P-201ENST00000384579 139 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 MIR145-201ENST00000384967 88 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-893P-201ENST00000458841 100 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RPL39P34-201ENST00000477141 156 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 MIR378D2-201ENST00000580636 98 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 AL356055.1-201ENST00000602528 446 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 U6.109-201ENST00000636749 87 ntBASIC-0.12□□□□□ -2.43
TRAV39A0A0B4J263 RNU4-58P-201ENST00000363192 141 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-103P-201ENST00000363686 107 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 MIR548L-201ENST00000408303 86 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 RNU4-43P-201ENST00000410628 137 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 SCARNA15-202ENST00000516881 127 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 MIR4282-201ENST00000583613 67 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 MIR4290-201ENST00000583807 95 ntBASIC-0.13□□□□□ -2.43
TRAV39A0A0B4J263 MIR101-2-201ENST00000362195 79 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 SNORA33.2-201ENST00000365413 134 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 SNORA32-201ENST00000384072 121 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-639P-201ENST00000384074 107 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 RNY3P16-201ENST00000516338 101 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-635P-201ENST00000516651 102 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 MIR4744-201ENST00000581563 82 ntBASIC-0.14□□□□□ -2.43
TRAV39A0A0B4J263 SNORD115-24-201ENST00000363528 82 ntBASIC-0.15□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-978P-201ENST00000364371 103 ntBASIC-0.15□□□□□ -2.43
TRAV39A0A0B4J263 RNU6-867P-201ENST00000364956 107 ntBASIC-0.15□□□□□ -2.43
TRAV39A0A0B4J263 MIR1302-6-201ENST00000408466 90 ntBASIC-0.15□□□□□ -2.43
TRAV39A0A0B4J263 RNU7-113P-201ENST00000459273 62 ntBASIC-0.15□□□□□ -2.43
TRAV39A0A0B4J263 MTATP8P1-201ENST00000467115 207 ntBASIC-0.15□□□□□ -2.43
TRAV39A0A0B4J263 MIR335-201ENST00000362173 94 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNY1P6-201ENST00000384193 109 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 MT-TW-201ENST00000387382 68 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-848P-201ENST00000515948 107 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-617P-201ENST00000516147 107 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-473P-201ENST00000516164 107 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNA5SP33-201ENST00000516687 98 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 AP003072.1-201ENST00000531740 145 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 MIR4643-201ENST00000577473 78 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 RNU2-4P-201ENST00000606190 192 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV39A0A0B4J263 MIR624-201ENST00000385217 97 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-578P-201ENST00000390980 103 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-493P-201ENST00000391321 108 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 RNA5SP144-201ENST00000410846 116 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 RNU7-35P-201ENST00000517174 62 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 AC006504.6-201ENST00000590142 199 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 U6.104-201ENST00000637979 90 ntBASIC-0.17□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 RNA5SP257-201ENST00000363023 116 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-302P-201ENST00000365249 107 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms