Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 AC090616.6-201ENST00000582640 721 ntBASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC31.41■■■□□ 2.62
BIVM-ERCC5R4GMW8 IRX1P1-201ENST00000438849 1838 ntBASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 MTMR9LP-203ENST00000426597 1545 ntBASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 AC006333.2-201ENST00000607957 2099 ntBASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
BIVM-ERCC5R4GMW8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 AC112907.3-201ENST00000577781 2400 ntBASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 MIR564-202ENST00000385049 94 ntBASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 AC099336.1-202ENST00000602961 463 ntBASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BIVM-ERCC5R4GMW8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 RNA5SP419-201ENST00000515908 135 ntBASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 AL121772.3-201ENST00000610840 674 ntBASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 REXO1L6P-202ENST00000619970 1078 ntBASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BIVM-ERCC5R4GMW8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
BIVM-ERCC5R4GMW8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 NSUN5P1-202ENST00000421140 1535 ntBASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 NSUN5P2-203ENST00000457352 1529 ntBASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BIVM-ERCC5R4GMW8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 SAPCD2P3-201ENST00000455031 850 ntBASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC005332.3-201ENST00000589904 676 ntBASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 KRT8P50-201ENST00000562022 1438 ntBASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 Z69720.1-201ENST00000601483 472 ntBASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 AL121912.1-201ENST00000603683 238 ntBASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC31.35■■■□□ 2.61
BIVM-ERCC5R4GMW8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms