Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 MIR564-202ENST00000385049 94 ntBASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 AC117947.1-201ENST00000427448 529 ntBASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 AL357033.4-201ENST00000617703 1807 ntBASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 TMPOP1-202ENST00000424642 1267 ntBASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 AL512604.3-201ENST00000569583 964 ntBASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN16Q9Y5I7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 AC093525.10-201ENST00000625130 1569 ntBASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN16Q9Y5I7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 LIN28AP1-201ENST00000429574 405 ntBASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 BX664615.1-201ENST00000443558 458 ntBASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 NEK4P2-201ENST00000580004 1012 ntBASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN16Q9Y5I7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 AC139887.4-201ENST00000607877 719 ntBASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN16Q9Y5I7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms