Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Gm13401-201ENSMUST00000117074 291 ntBASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Gm7291-201ENSMUST00000199147 382 ntBASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trem1Q9JKE2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Gm10493-201ENSMUST00000097270 612 ntBASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trem1Q9JKE2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Gm10033-202ENSMUST00000211874 928 ntBASIC14.38□□□□□ -0.11
Trem1Q9JKE2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trem1Q9JKE2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.37□□□□□ -0.11
Trem1Q9JKE2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trem1Q9JKE2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trem1Q9JKE2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms