Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4cQ9D7F7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Sybu-209ENSMUST00000228639 4113 ntBASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp4cQ9D7F7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Mir1668-201ENSMUST00000184114 107 ntBASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.16■□□□□ 0.66
Chmp4cQ9D7F7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4cQ9D7F7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.14■□□□□ 0.66
Chmp4cQ9D7F7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.14■□□□□ 0.66
Chmp4cQ9D7F7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Chmp4cQ9D7F7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms