Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3Q9BZ76 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 KRT18P3-201ENST00000451602 1288 ntBASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 SPCS2P1-201ENST00000561636 679 ntBASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 MIR4674-201ENST00000582457 87 ntBASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 AL136038.4-201ENST00000603606 1261 ntBASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 MIR2861-201ENST00000636310 90 ntBASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3Q9BZ76 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 KRT8P17-201ENST00000453110 1448 ntBASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 AC007274.1-201ENST00000439805 662 ntBASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 AP006288.1-201ENST00000446065 395 ntBASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 AC106028.4-201ENST00000614509 607 ntBASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3Q9BZ76 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 Z83836.1-201ENST00000624605 1642 ntBASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 AC018553.1-201ENST00000616682 1458 ntBASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 GK-202ENST00000378941 458 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms