Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 KRT8P3-201ENST00000519669 1449 ntBASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AC129492.6-201ENST00000611383 1305 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AL139099.5-201ENST00000635274 300 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 HNRNPFP1-201ENST00000391730 1133 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AC027307.3-201ENST00000594262 1100 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CRB3P1-201ENST00000449338 276 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 FAM8A2P-201ENST00000528813 1142 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMCN1Q96RW7 AL121603.2-201ENST00000557373 2117 ntBASIC5.74□□□□□ -1.49
HMCN1Q96RW7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 RN7SL606P-201ENST00000472779 293 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 TP73-AS1-210ENST00000637775 1455 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms