Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 KRT17P6-201ENST00000453795 1220 ntBASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 AP000867.3-201ENST00000524675 377 ntBASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAPGEF4Q8WZA2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
RAPGEF4Q8WZA2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 Z83836.1-201ENST00000624605 1642 ntBASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 TREX1-205ENST00000625293 1783 ntBASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RAPGEF4Q8WZA2 KRT8P10-201ENST00000450021 1447 ntBASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 TSPY19P-201ENST00000418461 509 ntBASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 TSPY18P-201ENST00000441642 509 ntBASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 AL732292.2-201ENST00000609649 430 ntBASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF4Q8WZA2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 MIR564-202ENST00000385049 94 ntBASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 TOB2P1-201ENST00000469761 992 ntBASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF4Q8WZA2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.67■■□□□ 1.54
RAPGEF4Q8WZA2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF4Q8WZA2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.66■■□□□ 1.54
RAPGEF4Q8WZA2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms