Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 FAAHP1-202ENST00000446499 1238 ntBASIC14.66□□□□□ -0.06
LINC01006Q8NI28 UNC93B7-201ENST00000509439 705 ntBASIC14.66□□□□□ -0.06
LINC01006Q8NI28 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 RNF126P1-202ENST00000569893 925 ntBASIC14.66□□□□□ -0.06
LINC01006Q8NI28 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 AC010240.3-201ENST00000607688 395 ntBASIC14.66□□□□□ -0.06
LINC01006Q8NI28 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01006Q8NI28 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 DRAXINP1-201ENST00000437611 948 ntBASIC14.64□□□□□ -0.07
LINC01006Q8NI28 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 FDX1P1-201ENST00000449115 551 ntBASIC14.64□□□□□ -0.07
LINC01006Q8NI28 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01006Q8NI28 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms