Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 IGHGP-201ENST00000390555 1178 ntBASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 AL355877.3-201ENST00000622820 899 ntBASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 AL049796.1-201ENST00000565336 1766 ntBASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 NUS1P2-201ENST00000417358 873 ntBASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 RFPL4AP1-201ENST00000530883 850 ntBASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 MIR3687-2-201ENST00000577708 61 ntBASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 MIR3687-1-201ENST00000614492 61 ntBASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 AP001271.2-201ENST00000624018 1556 ntBASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 METTL21AP1-201ENST00000438852 635 ntBASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC168Q8NDH2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 KRT18P3-201ENST00000451602 1288 ntBASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 MINOS1P3-201ENST00000457048 203 ntBASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC168Q8NDH2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms