Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX5Q8N196 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SIX5Q8N196 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.27■□□□□ 0.68
SIX5Q8N196 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SIX5Q8N196 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
SIX5Q8N196 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.27■□□□□ 0.68
SIX5Q8N196 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SIX5Q8N196 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 KRT18P13-201ENST00000400056 1290 ntBASIC19.27■□□□□ 0.68
SIX5Q8N196 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.27■□□□□ 0.68
SIX5Q8N196 AC074051.2-201ENST00000565115 352 ntBASIC19.27■□□□□ 0.68
SIX5Q8N196 MIR3180-5-201ENST00000583743 153 ntBASIC19.27■□□□□ 0.68
SIX5Q8N196 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SIX5Q8N196 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.27■□□□□ 0.68
SIX5Q8N196 AL353801.3-201ENST00000609898 542 ntBASIC19.27■□□□□ 0.68
SIX5Q8N196 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX5Q8N196 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SIX5Q8N196 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SIX5Q8N196 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SIX5Q8N196 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SIX5Q8N196 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.26■□□□□ 0.67
SIX5Q8N196 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SIX5Q8N196 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.26■□□□□ 0.67
SIX5Q8N196 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.26■□□□□ 0.67
SIX5Q8N196 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.26■□□□□ 0.67
SIX5Q8N196 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SIX5Q8N196 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SIX5Q8N196 AC112497.1-201ENST00000624824 639 ntBASIC19.26■□□□□ 0.67
SIX5Q8N196 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.26■□□□□ 0.67
SIX5Q8N196 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.26■□□□□ 0.67
SIX5Q8N196 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SIX5Q8N196 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIX5Q8N196 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
SIX5Q8N196 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.25■□□□□ 0.67
SIX5Q8N196 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.25■□□□□ 0.67
SIX5Q8N196 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 TSPY12P-201ENST00000421279 868 ntBASIC19.25■□□□□ 0.67
SIX5Q8N196 PMS2P1-201ENST00000431037 1228 ntBASIC19.25■□□□□ 0.67
SIX5Q8N196 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.25■□□□□ 0.67
SIX5Q8N196 MCCD1P1-208ENST00000445732 328 ntBASIC19.25■□□□□ 0.67
SIX5Q8N196 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.25■□□□□ 0.67
SIX5Q8N196 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.25■□□□□ 0.67
SIX5Q8N196 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SIX5Q8N196 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 MIR3917-201ENST00000580971 93 ntBASIC19.25■□□□□ 0.67
SIX5Q8N196 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.25■□□□□ 0.67
SIX5Q8N196 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 Z83836.1-201ENST00000624605 1642 ntBASIC19.25■□□□□ 0.67
SIX5Q8N196 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 LINC00167-201ENST00000530583 1419 ntBASIC19.25■□□□□ 0.67
SIX5Q8N196 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIX5Q8N196 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
SIX5Q8N196 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.24■□□□□ 0.67
SIX5Q8N196 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms