Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 AC116407.3-201ENST00000623905 1129 ntBASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 KRT8P3-201ENST00000519669 1449 ntBASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 AC027601.4-201ENST00000611259 610 ntBASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 AC083906.6-201ENST00000641366 219 ntBASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 AC079781.4-201ENST00000641908 219 ntBASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCRAQ6ISU1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 RPSAP43-201ENST00000402237 625 ntBASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 BNIP3P18-201ENST00000593976 575 ntBASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCRAQ6ISU1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCRAQ6ISU1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCRAQ6ISU1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCRAQ6ISU1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 RPS2P28-201ENST00000314255 741 ntBASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 AC132008.2-207ENST00000454517 770 ntBASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 HOXB1-202ENST00000577092 1414 ntBASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCRAQ6ISU1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 GPX1P2-201ENST00000429271 606 ntBASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 SCARNA2-201ENST00000458748 420 ntBASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 AL356488.2-201ENST00000602755 427 ntBASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 AC104109.2-201ENST00000602919 1418 ntBASIC19.38■□□□□ 0.69
PTCRAQ6ISU1 AC024563.2-201ENST00000603282 481 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms