Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SMAD3P84022 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SMAD3P84022 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SMAD3P84022 CLDN5-201ENST00000403084 2357 ntBASIC20.33■□□□□ 0.85
SMAD3P84022 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD3P84022 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.33■□□□□ 0.85
SMAD3P84022 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.33■□□□□ 0.85
SMAD3P84022 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.33■□□□□ 0.85
SMAD3P84022 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.33■□□□□ 0.85
SMAD3P84022 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.33■□□□□ 0.85
SMAD3P84022 AC140113.2-201ENST00000604370 208 ntBASIC20.33■□□□□ 0.85
SMAD3P84022 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.33■□□□□ 0.85
SMAD3P84022 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD3P84022 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SMAD3P84022 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.33■□□□□ 0.84
SMAD3P84022 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD3P84022 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD3P84022 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SMAD3P84022 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.32■□□□□ 0.84
SMAD3P84022 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SMAD3P84022 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMAD3P84022 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.32■□□□□ 0.84
SMAD3P84022 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD3P84022 AC005332.3-201ENST00000589904 676 ntBASIC20.32■□□□□ 0.84
SMAD3P84022 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.32■□□□□ 0.84
SMAD3P84022 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMAD3P84022 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD3P84022 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMAD3P84022 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SMAD3P84022 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD3P84022 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.31■□□□□ 0.84
SMAD3P84022 AL691432.2-201ENST00000607222 2038 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD3P84022 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD3P84022 MIR564-202ENST00000385049 94 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 MIR940-201ENST00000401276 94 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SMAD3P84022 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.31■□□□□ 0.84
SMAD3P84022 MIR3180-5-201ENST00000583743 153 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.31■□□□□ 0.84
SMAD3P84022 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 AL390719.2-201ENST00000606993 987 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.31■□□□□ 0.84
SMAD3P84022 AC112497.1-201ENST00000624824 639 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMAD3P84022 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD3P84022 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD3P84022 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD3P84022 ZNF259P1-201ENST00000407656 1365 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 AC243591.1-201ENST00000452967 1364 ntBASIC20.31■□□□□ 0.84
SMAD3P84022 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD3P84022 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD3P84022 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD3P84022 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SMAD3P84022 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD3P84022 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.3■□□□□ 0.84
SMAD3P84022 RPL13AP23-201ENST00000480739 586 ntBASIC20.3■□□□□ 0.84
SMAD3P84022 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD3P84022 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 AC009065.1-201ENST00000564055 1225 ntBASIC20.3■□□□□ 0.84
SMAD3P84022 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMAD3P84022 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.3■□□□□ 0.84
SMAD3P84022 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.3■□□□□ 0.84
SMAD3P84022 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD3P84022 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms