Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 HNRNPDP1-201ENST00000439535 754 ntBASIC21.54■■□□□ 1.04
TM4SF4P48230 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.54■■□□□ 1.04
TM4SF4P48230 AC145285.3-201ENST00000564603 959 ntBASIC21.54■■□□□ 1.04
TM4SF4P48230 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.54■■□□□ 1.04
TM4SF4P48230 AP001160.2-201ENST00000596071 487 ntBASIC21.54■■□□□ 1.04
TM4SF4P48230 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.54■■□□□ 1.04
TM4SF4P48230 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.54■■□□□ 1.04
TM4SF4P48230 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TM4SF4P48230 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TM4SF4P48230 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF4P48230 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF4P48230 KRT89P-201ENST00000620027 1478 ntBASIC21.53■■□□□ 1.04
TM4SF4P48230 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF4P48230 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TM4SF4P48230 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.53■■□□□ 1.04
TM4SF4P48230 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 AL355877.3-201ENST00000622820 899 ntBASIC21.53■■□□□ 1.04
TM4SF4P48230 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF4P48230 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TM4SF4P48230 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TM4SF4P48230 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.52■■□□□ 1.04
TM4SF4P48230 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TM4SF4P48230 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TM4SF4P48230 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.52■■□□□ 1.04
TM4SF4P48230 RCC2P3-201ENST00000418112 1537 ntBASIC21.52■■□□□ 1.04
TM4SF4P48230 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TM4SF4P48230 RPS2P28-201ENST00000314255 741 ntBASIC21.52■■□□□ 1.04
TM4SF4P48230 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.52■■□□□ 1.04
TM4SF4P48230 RPSAP43-201ENST00000402237 625 ntBASIC21.52■■□□□ 1.04
TM4SF4P48230 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
TM4SF4P48230 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.52■■□□□ 1.04
TM4SF4P48230 AC098831.1-202ENST00000438821 336 ntBASIC21.52■■□□□ 1.04
TM4SF4P48230 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.52■■□□□ 1.04
TM4SF4P48230 AC114341.1-201ENST00000618070 349 ntBASIC21.52■■□□□ 1.04
TM4SF4P48230 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TM4SF4P48230 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.52■■□□□ 1.04
TM4SF4P48230 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TM4SF4P48230 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
TM4SF4P48230 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TM4SF4P48230 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TM4SF4P48230 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TM4SF4P48230 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.51■■□□□ 1.03
TM4SF4P48230 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.51■■□□□ 1.03
TM4SF4P48230 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.51■■□□□ 1.03
TM4SF4P48230 AC027601.4-201ENST00000611259 610 ntBASIC21.51■■□□□ 1.03
TM4SF4P48230 FAM197Y3-203ENST00000618346 717 ntBASIC21.51■■□□□ 1.03
TM4SF4P48230 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.51■■□□□ 1.03
TM4SF4P48230 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF4P48230 AC026310.3-201ENST00000625186 2373 ntBASIC21.51■■□□□ 1.03
TM4SF4P48230 AL512353.2-201ENST00000448759 1962 ntBASIC21.5■■□□□ 1.03
TM4SF4P48230 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.5■■□□□ 1.03
TM4SF4P48230 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
TM4SF4P48230 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.5■■□□□ 1.03
TM4SF4P48230 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.5■■□□□ 1.03
TM4SF4P48230 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF4P48230 FGFR3P6-201ENST00000457012 610 ntBASIC21.5■■□□□ 1.03
TM4SF4P48230 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.5■■□□□ 1.03
TM4SF4P48230 IGHV3-22-201ENST00000520721 359 ntBASIC21.5■■□□□ 1.03
TM4SF4P48230 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.5■■□□□ 1.03
TM4SF4P48230 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.5■■□□□ 1.03
TM4SF4P48230 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.5■■□□□ 1.03
TM4SF4P48230 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF4P48230 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TM4SF4P48230 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF4P48230 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF4P48230 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF4P48230 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TM4SF4P48230 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 TREX1-205ENST00000625293 1783 ntBASIC21.49■■□□□ 1.03
TM4SF4P48230 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.49■■□□□ 1.03
TM4SF4P48230 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF4P48230 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF4P48230 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms