Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.42■□□□□ 0.22
GDNFP39905 AC142086.2-201ENST00000569753 217 ntBASIC16.42■□□□□ 0.22
GDNFP39905 AC083880.1-201ENST00000608266 535 ntBASIC16.42■□□□□ 0.22
GDNFP39905 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.42■□□□□ 0.22
GDNFP39905 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GDNFP39905 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.42■□□□□ 0.22
GDNFP39905 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.42■□□□□ 0.22
GDNFP39905 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GDNFP39905 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.41■□□□□ 0.22
GDNFP39905 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 ID1-201ENST00000376105 1233 ntBASIC16.41■□□□□ 0.22
GDNFP39905 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.41■□□□□ 0.22
GDNFP39905 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.41■□□□□ 0.22
GDNFP39905 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.41■□□□□ 0.22
GDNFP39905 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
GDNFP39905 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.41■□□□□ 0.22
GDNFP39905 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GDNFP39905 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GDNFP39905 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 AC008764.6-201ENST00000595909 2069 ntBASIC16.41■□□□□ 0.22
GDNFP39905 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDNFP39905 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GDNFP39905 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.4■□□□□ 0.22
GDNFP39905 PRORSD1P-202ENST00000563365 2154 ntBASIC16.4■□□□□ 0.22
GDNFP39905 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GDNFP39905 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 AC069152.1-201ENST00000438030 544 ntBASIC16.4■□□□□ 0.22
GDNFP39905 AC023632.3-201ENST00000521633 145 ntBASIC16.4■□□□□ 0.22
GDNFP39905 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GDNFP39905 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
GDNFP39905 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDNFP39905 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GDNFP39905 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.4■□□□□ 0.22
GDNFP39905 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GDNFP39905 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.39■□□□□ 0.21
GDNFP39905 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GDNFP39905 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
GDNFP39905 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GDNFP39905 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GDNFP39905 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.39■□□□□ 0.21
GDNFP39905 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.39■□□□□ 0.21
GDNFP39905 AC097658.1-201ENST00000475555 843 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms