Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
HOXC8P31273 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.6■□□□□ 0.89
HOXC8P31273 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC8P31273 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HOXC8P31273 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HOXC8P31273 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
HOXC8P31273 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HOXC8P31273 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 AC006333.2-201ENST00000607957 2099 ntBASIC20.59■□□□□ 0.89
HOXC8P31273 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.59■□□□□ 0.89
HOXC8P31273 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXC8P31273 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
HOXC8P31273 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.59■□□□□ 0.89
HOXC8P31273 RN7SL510P-201ENST00000581311 263 ntBASIC20.59■□□□□ 0.89
HOXC8P31273 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.59■□□□□ 0.89
HOXC8P31273 AL390719.2-201ENST00000606993 987 ntBASIC20.59■□□□□ 0.89
HOXC8P31273 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXC8P31273 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXC8P31273 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXC8P31273 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC8P31273 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.59■□□□□ 0.89
HOXC8P31273 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC8P31273 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXC8P31273 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HOXC8P31273 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC8P31273 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC8P31273 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC8P31273 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HOXC8P31273 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXC8P31273 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXC8P31273 UNC93B7-201ENST00000509439 705 ntBASIC20.58■□□□□ 0.89
HOXC8P31273 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.58■□□□□ 0.89
HOXC8P31273 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.58■□□□□ 0.89
HOXC8P31273 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXC8P31273 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXC8P31273 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HOXC8P31273 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.58■□□□□ 0.89
HOXC8P31273 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXC8P31273 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HOXC8P31273 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
HOXC8P31273 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC8P31273 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.58■□□□□ 0.88
HOXC8P31273 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC8P31273 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
HOXC8P31273 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC8P31273 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC8P31273 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HOXC8P31273 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXC8P31273 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXC8P31273 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXC8P31273 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXC8P31273 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXC8P31273 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HOXC8P31273 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXC8P31273 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC8P31273 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXC8P31273 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 Z83836.1-201ENST00000624605 1642 ntBASIC20.56■□□□□ 0.88
HOXC8P31273 KRT18P1-202ENST00000452408 1331 ntBASIC20.56■□□□□ 0.88
HOXC8P31273 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC8P31273 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HOXC8P31273 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HOXC8P31273 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HOXC8P31273 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms