Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC33■■■□□ 2.87
TOP2AP11388 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 PWWP2AP1-201ENST00000429776 2273 ntBASIC33■■■□□ 2.87
TOP2AP11388 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 NSUN5P1-202ENST00000421140 1535 ntBASIC33■■■□□ 2.87
TOP2AP11388 NSUN5P2-203ENST00000457352 1529 ntBASIC33■■■□□ 2.87
TOP2AP11388 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC33■■■□□ 2.87
TOP2AP11388 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC33■■■□□ 2.87
TOP2AP11388 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC33■■■□□ 2.87
TOP2AP11388 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC33■■■□□ 2.87
TOP2AP11388 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TOP2AP11388 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
TOP2AP11388 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC32.99■■■□□ 2.87
TOP2AP11388 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
TOP2AP11388 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC32.99■■■□□ 2.87
TOP2AP11388 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC32.99■■■□□ 2.87
TOP2AP11388 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC32.99■■■□□ 2.87
TOP2AP11388 AL662844.1-201ENST00000546340 181 ntBASIC32.99■■■□□ 2.87
TOP2AP11388 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC32.99■■■□□ 2.87
TOP2AP11388 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
TOP2AP11388 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC32.99■■■□□ 2.87
TOP2AP11388 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
TOP2AP11388 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC32.99■■■□□ 2.87
TOP2AP11388 AC006333.2-201ENST00000607957 2099 ntBASIC32.99■■■□□ 2.87
TOP2AP11388 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC32.98■■■□□ 2.87
TOP2AP11388 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC32.98■■■□□ 2.87
TOP2AP11388 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC32.98■■■□□ 2.87
TOP2AP11388 FICD-205ENST00000552758 603 ntTSL 2 BASIC32.98■■■□□ 2.87
TOP2AP11388 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC32.98■■■□□ 2.87
TOP2AP11388 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
TOP2AP11388 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC32.98■■■□□ 2.87
TOP2AP11388 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
TOP2AP11388 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
TOP2AP11388 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
TOP2AP11388 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
TOP2AP11388 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC32.97■■■□□ 2.87
TOP2AP11388 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC32.97■■■□□ 2.87
TOP2AP11388 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
TOP2AP11388 AC068587.9-201ENST00000641814 219 ntBASIC32.97■■■□□ 2.87
TOP2AP11388 CYP51A1P1-201ENST00000492267 1507 ntBASIC32.97■■■□□ 2.87
TOP2AP11388 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TOP2AP11388 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC32.97■■■□□ 2.87
TOP2AP11388 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC32.97■■■□□ 2.87
TOP2AP11388 CALM1-205ENST00000553542 877 ntTSL 5 BASIC32.97■■■□□ 2.87
TOP2AP11388 AC120114.3-201ENST00000611923 658 ntBASIC32.97■■■□□ 2.87
TOP2AP11388 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC32.97■■■□□ 2.87
TOP2AP11388 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
TOP2AP11388 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC32.96■■■□□ 2.87
TOP2AP11388 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC32.96■■■□□ 2.87
TOP2AP11388 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC32.96■■■□□ 2.87
TOP2AP11388 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC32.96■■■□□ 2.87
TOP2AP11388 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC32.96■■■□□ 2.87
TOP2AP11388 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
TOP2AP11388 CALM3-211ENST00000598871 561 ntTSL 4 BASIC32.96■■■□□ 2.87
TOP2AP11388 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TOP2AP11388 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC32.95■■■□□ 2.87
TOP2AP11388 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
TOP2AP11388 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC32.95■■■□□ 2.87
TOP2AP11388 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
TOP2AP11388 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
TOP2AP11388 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
TOP2AP11388 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
TOP2AP11388 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC32.95■■■□□ 2.87
TOP2AP11388 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
TOP2AP11388 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC32.95■■■□□ 2.86
TOP2AP11388 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
TOP2AP11388 AC125437.2-201ENST00000625180 2167 ntBASIC32.95■■■□□ 2.86
TOP2AP11388 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
TOP2AP11388 IRX1P1-201ENST00000438849 1838 ntBASIC32.94■■■□□ 2.86
TOP2AP11388 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
TOP2AP11388 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
TOP2AP11388 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
TOP2AP11388 PPOX-214ENST00000535223 664 ntTSL 3 BASIC32.94■■■□□ 2.86
TOP2AP11388 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
TOP2AP11388 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC32.94■■■□□ 2.86
TOP2AP11388 LINC01006-201ENST00000333319 2292 ntBASIC32.94■■■□□ 2.86
TOP2AP11388 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC32.94■■■□□ 2.86
TOP2AP11388 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms