Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CTSBP07858 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.87■□□□□ 0.45
CTSBP07858 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.87■□□□□ 0.45
CTSBP07858 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.87■□□□□ 0.45
CTSBP07858 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 MIR3180-5-201ENST00000583743 153 ntBASIC17.87■□□□□ 0.45
CTSBP07858 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.87■□□□□ 0.45
CTSBP07858 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CTSBP07858 AC024243.1-201ENST00000609234 778 ntBASIC17.87■□□□□ 0.45
CTSBP07858 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.87■□□□□ 0.45
CTSBP07858 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.87■□□□□ 0.45
CTSBP07858 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.87■□□□□ 0.45
CTSBP07858 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.87■□□□□ 0.45
CTSBP07858 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CTSBP07858 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSBP07858 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.86■□□□□ 0.45
CTSBP07858 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
CTSBP07858 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSBP07858 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTSBP07858 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.86■□□□□ 0.45
CTSBP07858 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 AL031133.1-201ENST00000406807 723 ntBASIC17.86■□□□□ 0.45
CTSBP07858 SPDYE15P-201ENST00000424157 909 ntBASIC17.86■□□□□ 0.45
CTSBP07858 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.86■□□□□ 0.45
CTSBP07858 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.86■□□□□ 0.45
CTSBP07858 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSBP07858 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.86■□□□□ 0.45
CTSBP07858 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.86■□□□□ 0.45
CTSBP07858 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSBP07858 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.86■□□□□ 0.45
CTSBP07858 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CTSBP07858 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.85■□□□□ 0.45
CTSBP07858 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.85■□□□□ 0.45
CTSBP07858 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.85■□□□□ 0.45
CTSBP07858 NEK4P2-201ENST00000580004 1012 ntBASIC17.85■□□□□ 0.45
CTSBP07858 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.85■□□□□ 0.45
CTSBP07858 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.85■□□□□ 0.45
CTSBP07858 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.85■□□□□ 0.45
CTSBP07858 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTSBP07858 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CTSBP07858 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CTSBP07858 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTSBP07858 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSBP07858 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSBP07858 AL109659.2-201ENST00000606809 1674 ntBASIC17.84■□□□□ 0.45
CTSBP07858 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSBP07858 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.84■□□□□ 0.45
CTSBP07858 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.84■□□□□ 0.45
CTSBP07858 AC092647.4-201ENST00000457211 535 ntBASIC17.84■□□□□ 0.45
CTSBP07858 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.84■□□□□ 0.45
CTSBP07858 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSBP07858 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSBP07858 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTSBP07858 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSBP07858 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms