Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CAPNS1P04632 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CAPNS1P04632 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CAPNS1P04632 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CAPNS1P04632 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.76■□□□□ 0.59
CAPNS1P04632 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CAPNS1P04632 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CAPNS1P04632 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.76■□□□□ 0.59
CAPNS1P04632 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.76■□□□□ 0.59
CAPNS1P04632 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.76■□□□□ 0.59
CAPNS1P04632 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.76■□□□□ 0.59
CAPNS1P04632 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.76■□□□□ 0.59
CAPNS1P04632 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CAPNS1P04632 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CAPNS1P04632 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPNS1P04632 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CAPNS1P04632 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CAPNS1P04632 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.75■□□□□ 0.59
CAPNS1P04632 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CAPNS1P04632 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.75■□□□□ 0.59
CAPNS1P04632 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CAPNS1P04632 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPNS1P04632 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.75■□□□□ 0.59
CAPNS1P04632 AC130371.2-201ENST00000619443 611 ntBASIC18.75■□□□□ 0.59
CAPNS1P04632 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPNS1P04632 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.75■□□□□ 0.59
CAPNS1P04632 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.75■□□□□ 0.59
CAPNS1P04632 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPNS1P04632 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CAPNS1P04632 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPNS1P04632 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.74■□□□□ 0.59
CAPNS1P04632 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CAPNS1P04632 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 AC020916.1-201ENST00000587762 1774 ntBASIC18.74■□□□□ 0.59
CAPNS1P04632 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CAPNS1P04632 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.74■□□□□ 0.59
CAPNS1P04632 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.74■□□□□ 0.59
CAPNS1P04632 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.74■□□□□ 0.59
CAPNS1P04632 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
CAPNS1P04632 AC069148.1-201ENST00000608741 768 ntBASIC18.74■□□□□ 0.59
CAPNS1P04632 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CAPNS1P04632 AC141257.4-201ENST00000634557 245 ntBASIC18.74■□□□□ 0.59
CAPNS1P04632 AC136944.6-201ENST00000634818 245 ntBASIC18.74■□□□□ 0.59
CAPNS1P04632 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CAPNS1P04632 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CAPNS1P04632 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.74■□□□□ 0.59
CAPNS1P04632 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CAPNS1P04632 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPNS1P04632 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CAPNS1P04632 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAPNS1P04632 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPNS1P04632 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CAPNS1P04632 AC004980.1-204ENST00000429707 299 ntBASIC18.73■□□□□ 0.59
CAPNS1P04632 TSPY21P-201ENST00000433481 731 ntBASIC18.73■□□□□ 0.59
CAPNS1P04632 TSPY23P-201ENST00000440136 739 ntBASIC18.73■□□□□ 0.59
CAPNS1P04632 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.73■□□□□ 0.59
CAPNS1P04632 HOMER2P1-201ENST00000455653 964 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms