Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN3O15551 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CLDN3O15551 GPAT2P1-201ENST00000444924 1672 ntBASIC20.59■□□□□ 0.89
CLDN3O15551 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN3O15551 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN3O15551 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN3O15551 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.59■□□□□ 0.89
CLDN3O15551 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLDN3O15551 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 AL512353.2-201ENST00000448759 1962 ntBASIC20.59■□□□□ 0.89
CLDN3O15551 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLDN3O15551 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN3O15551 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLDN3O15551 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN3O15551 AL049812.1-201ENST00000432563 2267 ntBASIC20.58■□□□□ 0.89
CLDN3O15551 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN3O15551 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
CLDN3O15551 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CLDN3O15551 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CLDN3O15551 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 KRT18P57-201ENST00000443599 1254 ntBASIC20.58■□□□□ 0.89
CLDN3O15551 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN3O15551 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN3O15551 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN3O15551 MIR4674-201ENST00000582457 87 ntBASIC20.58■□□□□ 0.89
CLDN3O15551 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN3O15551 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN3O15551 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN3O15551 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN3O15551 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN3O15551 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN3O15551 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN3O15551 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN3O15551 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN3O15551 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLDN3O15551 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN3O15551 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN3O15551 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN3O15551 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CLDN3O15551 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CLDN3O15551 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.57■□□□□ 0.88
CLDN3O15551 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN3O15551 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN3O15551 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN3O15551 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLDN3O15551 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 AL023284.2-201ENST00000405850 579 ntBASIC20.57■□□□□ 0.88
CLDN3O15551 KRT8P45-201ENST00000414328 1447 ntBASIC20.57■□□□□ 0.88
CLDN3O15551 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN3O15551 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN3O15551 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.57■□□□□ 0.88
CLDN3O15551 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CLDN3O15551 RN7SL850P-201ENST00000579959 291 ntBASIC20.57■□□□□ 0.88
CLDN3O15551 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
CLDN3O15551 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN3O15551 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CLDN3O15551 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN3O15551 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN3O15551 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN3O15551 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN3O15551 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN3O15551 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms