Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SEC1P-202ENST00000473944 940 ntBASIC18.44■□□□□ 0.54
C4orf47A7E2U8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 AC074051.2-201ENST00000565115 352 ntBASIC18.44■□□□□ 0.54
C4orf47A7E2U8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C4orf47A7E2U8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 AC112907.3-201ENST00000577781 2400 ntBASIC18.43■□□□□ 0.54
C4orf47A7E2U8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 MIR574-201ENST00000385209 96 ntBASIC18.43■□□□□ 0.54
C4orf47A7E2U8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.43■□□□□ 0.54
C4orf47A7E2U8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 TSPY12P-201ENST00000421279 868 ntBASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.42■□□□□ 0.54
C4orf47A7E2U8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 LINC00167-201ENST00000530583 1419 ntBASIC18.41■□□□□ 0.54
C4orf47A7E2U8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 AL023284.2-201ENST00000405850 579 ntBASIC18.41■□□□□ 0.54
C4orf47A7E2U8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 AC020907.5-201ENST00000624372 1936 ntBASIC18.41■□□□□ 0.54
C4orf47A7E2U8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C4orf47A7E2U8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 AL512408.1-201ENST00000569378 2000 ntBASIC18.4■□□□□ 0.54
C4orf47A7E2U8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms