Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 FAM197Y3-203ENST00000618346 717 ntBASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 AC083906.6-201ENST00000641366 219 ntBASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 AC079781.4-201ENST00000641908 219 ntBASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL6A6A6NMZ7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 AC092720.2-201ENST00000602388 1665 ntBASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 MIR3180-5-201ENST00000583743 153 ntBASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COL6A6A6NMZ7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 GPR32P1-201ENST00000601788 811 ntBASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL6A6A6NMZ7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL6A6A6NMZ7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL6A6A6NMZ7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.96■□□□□ 0.3
COL6A6A6NMZ7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AC239800.4-201ENST00000603712 296 ntBASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 POM121L3P-201ENST00000419331 1163 ntBASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AC005332.3-201ENST00000589904 676 ntBASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AL591684.3-201ENST00000605187 298 ntBASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL6A6A6NMZ7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL6A6A6NMZ7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.94■□□□□ 0.3
COL6A6A6NMZ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL6A6A6NMZ7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms