Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 Y_RNA.430-201ENST00000384081 110 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 AP003327.1-201ENST00000529684 127 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.15□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-403P-201ENST00000363163 104 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 SNORA36.1-201ENST00000363424 132 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 SNORA79-201ENST00000408376 140 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.618-201ENST00000410949 107 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 AC073261.1-201ENST00000429409 121 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.679-201ENST00000516416 91 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 AL356055.1-201ENST00000602528 446 ntBASIC0.14□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 SNORA20-201ENST00000384662 132 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-713P-201ENST00000384761 107 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 U8.15-201ENST00000390947 134 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-381P-201ENST00000391259 108 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 AL512326.2-201ENST00000426359 151 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-561P-201ENST00000516222 102 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 AL365265.1-201ENST00000621045 234 ntBASIC0.13□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.176-201ENST00000363815 109 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-728P-201ENST00000365375 104 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 SNORA33.2-201ENST00000365413 134 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-639P-201ENST00000384074 107 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-1109P-201ENST00000391187 107 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 SEPT7P4-201ENST00000437076 306 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 AL442663.2-201ENST00000554385 511 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 AC141846.1-201ENST00000568348 142 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 MIR6082-201ENST00000613604 109 ntBASIC0.12□□□□□ -2.39
AP4B1Q9Y6B7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
AP4B1Q9Y6B7 RNU7-70P-201ENST00000516941 66 ntBASIC0.11□□□□□ -2.39
AP4B1Q9Y6B7 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
AP4B1Q9Y6B7 AL365205.2-201ENST00000594586 68 ntBASIC0.11□□□□□ -2.39
AP4B1Q9Y6B7 MIR335-201ENST00000362173 94 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 SNORA22.1-201ENST00000362701 134 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 RNA5SP257-201ENST00000363023 116 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 RNU4-17P-201ENST00000365598 141 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 RNU2-59P-201ENST00000410482 191 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 RNA5SP268-201ENST00000516828 124 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 AC112693.2-201ENST00000556538 232 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 MIR4491-201ENST00000581087 68 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 MIR4282-201ENST00000583613 67 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 AC021613.1-201ENST00000623880 111 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
AP4B1Q9Y6B7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.416-201ENST00000384014 113 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.512-201ENST00000384518 102 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 SNORA72.6-201ENST00000384520 129 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 SNORA31.14-201ENST00000516728 116 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-765P-201ENST00000516916 99 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 MIR6841-201ENST00000637129 72 ntBASIC0.09□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.08□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.08□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.08□□□□□ -2.4
AP4B1Q9Y6B7 RNU4-43P-201ENST00000410628 137 ntBASIC0.08□□□□□ -2.4
AP4B1Q9Y6B7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.08□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-103P-201ENST00000363686 107 ntBASIC0.07□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-949P-201ENST00000384040 107 ntBASIC0.07□□□□□ -2.4
AP4B1Q9Y6B7 AC096949.1-201ENST00000412047 152 ntBASIC0.07□□□□□ -2.4
AP4B1Q9Y6B7 MTCYBP6-201ENST00000441810 138 ntBASIC0.07□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.701-201ENST00000516812 110 ntBASIC0.07□□□□□ -2.4
AP4B1Q9Y6B7 U6.104-201ENST00000637979 90 ntBASIC0.07□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.262-201ENST00000364641 102 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 SNORA18-201ENST00000384416 132 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 MIR1302-6-201ENST00000408466 90 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 SUMO1P3-201ENST00000439961 304 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 AL121914.1-201ENST00000450188 156 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-635P-201ENST00000516651 102 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-135P-201ENST00000516769 101 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 AL442067.1-201ENST00000613261 223 ntBASIC0.06□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-797P-201ENST00000363101 109 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.483-201ENST00000384380 101 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 MT-TW-201ENST00000387382 68 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 SNORD116-25-201ENST00000516517 92 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 AC044792.1-201ENST00000593294 196 ntBASIC0.05□□□□□ -2.4
AP4B1Q9Y6B7 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 423.3 ms