Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC106800.4-201ENST00000614905 153 ntBASIC1.12□□□□□ -2.23
PKP3Q9Y446 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PKP3Q9Y446 Y_RNA.338-201ENST00000365320 114 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 SNORD12C-201ENST00000386307 89 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 MIR4305-201ENST00000583252 102 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 MIR4781-201ENST00000585250 76 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 TUG1_4.1-201ENST00000619464 181 ntBASIC1.11□□□□□ -2.23
PKP3Q9Y446 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PKP3Q9Y446 Y_RNA.366-201ENST00000365540 102 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 MIR588-201ENST00000384900 83 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 RNU6-257P-201ENST00000410238 98 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 RNU6-994P-201ENST00000410507 111 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 MTND4LP9-201ENST00000427694 174 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
PKP3Q9Y446 Y_RNA.114-201ENST00000363265 113 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 RNU6-580P-201ENST00000365159 107 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 MIR613-201ENST00000385248 95 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.09□□□□□ -2.23
PKP3Q9Y446 snoU13.2-201ENST00000459201 104 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 RNU7-164P-201ENST00000459221 62 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 RNU7-113P-201ENST00000459273 62 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
PKP3Q9Y446 AC108081.1-201ENST00000604358 221 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 AL137067.1-201ENST00000615933 120 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 MIR6740-201ENST00000618268 113 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
PKP3Q9Y446 RNU6-647P-201ENST00000364243 107 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 Y_RNA.294-201ENST00000364916 102 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 SNORD50.2-201ENST00000365465 70 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 RNU6-187P-201ENST00000384139 106 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 RNA5SP237-201ENST00000410414 113 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.08□□□□□ -2.24
PKP3Q9Y446 RNU6-94P-201ENST00000607728 107 ntBASIC1.08□□□□□ -2.24
PKP3Q9Y446 Y_RNA.171-201ENST00000363760 102 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 RNU6-392P-201ENST00000364926 101 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 RNU6-1165P-201ENST00000410119 107 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 SUMO1P3-201ENST00000439961 304 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 AC067940.1-201ENST00000458411 300 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 AC113410.1-201ENST00000505029 247 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 RNU2-35P-201ENST00000516446 142 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 RNU6-1258P-201ENST00000516911 111 ntBASIC1.07□□□□□ -2.24
PKP3Q9Y446 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.07□□□□□ -2.24
PKP3Q9Y446 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
PKP3Q9Y446 Y_RNA.298-201ENST00000364960 107 ntBASIC1.06□□□□□ -2.24
PKP3Q9Y446 RNU6-1237P-201ENST00000384777 107 ntBASIC1.06□□□□□ -2.24
PKP3Q9Y446 Y_RNA.586-201ENST00000391146 98 ntBASIC1.06□□□□□ -2.24
PKP3Q9Y446 RNU7-123P-201ENST00000515911 60 ntBASIC1.06□□□□□ -2.24
PKP3Q9Y446 RNU6-1053P-201ENST00000515930 101 ntBASIC1.06□□□□□ -2.24
PKP3Q9Y446 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
PKP3Q9Y446 RNU6-704P-201ENST00000364162 103 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 RNU6-53P-201ENST00000365367 106 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 MIR539-201ENST00000365690 78 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 MIR563-201ENST00000385080 79 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 AL603908.1-201ENST00000406098 201 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 AL512326.2-201ENST00000426359 151 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 AL158147.1-201ENST00000443970 75 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 AC004812.1-201ENST00000540773 146 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
PKP3Q9Y446 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
PKP3Q9Y446 Y_RNA.280-201ENST00000364765 112 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 SNORA18-201ENST00000384416 132 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 Y_RNA.531-201ENST00000384589 121 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 MT-TF-201ENST00000387314 71 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 MIR942-201ENST00000401111 86 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 RNU6-321P-201ENST00000410912 106 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 RNY4P20-201ENST00000516678 93 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 RNA5SP33-201ENST00000516687 98 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
PKP3Q9Y446 AL662814.1-201ENST00000617364 121 ntBASIC1.04□□□□□ -2.24
PKP3Q9Y446 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PKP3Q9Y446 SNORD115-2-201ENST00000362842 82 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 SNORD115-20-201ENST00000365099 82 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 RNU6-934P-201ENST00000365154 107 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 Y_RNA.470-201ENST00000384307 117 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 RNU6-342P-201ENST00000384521 104 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 SNORD83.1-201ENST00000411362 77 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 MIR18B-201ENST00000454574 71 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 RNU6-1211P-201ENST00000459179 105 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 snoU13.21-201ENST00000459368 105 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 RN7SKP19-201ENST00000516016 252 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 uc_338.6-201ENST00000613544 171 ntBASIC1.03□□□□□ -2.24
PKP3Q9Y446 RNU6-235P-201ENST00000362644 107 ntBASIC1.02□□□□□ -2.25
PKP3Q9Y446 RNY1P10-201ENST00000363268 113 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms