Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 Y_RNA.705-201ENST00000516862 110 ntBASIC2.55□□□□□ -2
RTCBQ9Y3I0 MIR4764-201ENST00000580680 88 ntBASIC2.55□□□□□ -2
RTCBQ9Y3I0 MIR1245B-201ENST00000636115 69 ntBASIC2.55□□□□□ -2
RTCBQ9Y3I0 Z97988.1-201ENST00000637697 135 ntBASIC2.55□□□□□ -2
RTCBQ9Y3I0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
RTCBQ9Y3I0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
RTCBQ9Y3I0 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
RTCBQ9Y3I0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTCBQ9Y3I0 RNU7-2P-201ENST00000516096 62 ntBASIC2.54□□□□□ -2
RTCBQ9Y3I0 RNU6-917P-201ENST00000516294 104 ntBASIC2.54□□□□□ -2
RTCBQ9Y3I0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.54□□□□□ -2
RTCBQ9Y3I0 MIR4439-201ENST00000583746 80 ntBASIC2.54□□□□□ -2
RTCBQ9Y3I0 snoU13.31-201ENST00000607291 104 ntBASIC2.54□□□□□ -2
RTCBQ9Y3I0 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
RTCBQ9Y3I0 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 RNU6-342P-201ENST00000384521 104 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 MIR520C-201ENST00000385005 87 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 RNU6-592P-201ENST00000411333 103 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 BTF3P4-201ENST00000418852 495 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 RNU7-35P-201ENST00000517174 62 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 MIR8065-201ENST00000620577 100 ntBASIC2.53□□□□□ -2
RTCBQ9Y3I0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
RTCBQ9Y3I0 RNU6-972P-201ENST00000391208 107 ntBASIC2.52□□□□□ -2.01
RTCBQ9Y3I0 MIR1287-201ENST00000408492 90 ntBASIC2.52□□□□□ -2.01
RTCBQ9Y3I0 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
RTCBQ9Y3I0 RNU7-193P-201ENST00000516723 65 ntBASIC2.52□□□□□ -2.01
RTCBQ9Y3I0 RNU6-203P-201ENST00000384038 104 ntBASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 Y_RNA.467-201ENST00000384297 102 ntBASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 RNU6-887P-201ENST00000410660 100 ntBASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 RNU6-602P-201ENST00000411155 105 ntBASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 IGLL4P-201ENST00000614590 133 ntBASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTCBQ9Y3I0 MIR378A-201ENST00000362177 66 ntBASIC2.5□□□□□ -2.01
RTCBQ9Y3I0 MIR206-201ENST00000384872 86 ntBASIC2.5□□□□□ -2.01
RTCBQ9Y3I0 RNU6-1275P-201ENST00000391087 107 ntBASIC2.5□□□□□ -2.01
RTCBQ9Y3I0 RNU2-40P-201ENST00000410833 196 ntBASIC2.5□□□□□ -2.01
RTCBQ9Y3I0 MIR7111-201ENST00000619751 72 ntBASIC2.5□□□□□ -2.01
RTCBQ9Y3I0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 RNY1P1-201ENST00000364372 112 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 AC004965.1-201ENST00000413033 213 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 AC090844.1-201ENST00000422019 156 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 UBL5P1-201ENST00000507979 193 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 RNU6-322P-201ENST00000516010 103 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 CYP3A52P-201ENST00000563326 91 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 MIR6895-201ENST00000613497 78 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 MIR376B-201ENST00000614515 100 ntBASIC2.49□□□□□ -2.01
RTCBQ9Y3I0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 Y_RNA.219-201ENST00000364232 113 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 RNA5SP190-201ENST00000365222 118 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 MIR194-1-201ENST00000384892 85 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 MIR653-201ENST00000385279 96 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 AC109327.2-201ENST00000448339 378 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 RNU7-79P-201ENST00000516082 62 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 Y_RNA.685-201ENST00000516532 108 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 MIR5089-201ENST00000580047 84 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 MIR5002-201ENST00000584713 97 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 MIR4251-201ENST00000635819 61 ntBASIC2.48□□□□□ -2.01
RTCBQ9Y3I0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 SNORD38.1-201ENST00000363863 68 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 SNORD116-22-201ENST00000384430 92 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 RNU6-813P-201ENST00000384691 107 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 SNORD13-201ENST00000459299 104 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 RNU6-1006P-201ENST00000516998 103 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 MIR548AO-201ENST00000579992 96 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 SNRPGP19-201ENST00000603826 189 ntBASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RTCBQ9Y3I0 Y_RNA.247-201ENST00000364500 92 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 RNU6-1307P-201ENST00000391012 103 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 AC003989.2-201ENST00000440224 169 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 SNORA25.15-201ENST00000516487 89 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 SNORD67.1-201ENST00000516618 108 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 RNU2-19P-201ENST00000517288 84 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 MIR3935-201ENST00000583472 104 ntBASIC2.46□□□□□ -2.02
RTCBQ9Y3I0 SNORD38B-201ENST00000384690 67 ntBASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 SNORD78.1-201ENST00000390866 65 ntBASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 RPS29P28-201ENST00000446439 141 ntBASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 AC022137.1-201ENST00000483735 151 ntBASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 SNORD38B-202ENST00000625943 69 ntBASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RTCBQ9Y3I0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 SNORD114-10-201ENST00000363409 72 ntBASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 SNORD116-10-201ENST00000363791 102 ntBASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 RNU6-865P-201ENST00000364772 107 ntBASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 SNORD58A-201ENST00000383875 65 ntBASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 Y_RNA.448-201ENST00000384185 108 ntBASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 RNU6-675P-201ENST00000384236 104 ntBASIC2.44□□□□□ -2.02
RTCBQ9Y3I0 MIR34C-201ENST00000384831 77 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms