Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR1302-7-201ENST00000408841 72 ntBASIC1.68□□□□□ -2.14
CDK11AQ9UQ88 OR2A41P-201ENST00000473586 105 ntBASIC1.68□□□□□ -2.14
CDK11AQ9UQ88 RNU6-346P-201ENST00000516288 111 ntBASIC1.68□□□□□ -2.14
CDK11AQ9UQ88 RNU2-60P-201ENST00000517290 128 ntBASIC1.68□□□□□ -2.14
CDK11AQ9UQ88 Y_RNA.757-201ENST00000578934 114 ntBASIC1.68□□□□□ -2.14
CDK11AQ9UQ88 MIR6717-201ENST00000622747 73 ntBASIC1.68□□□□□ -2.14
CDK11AQ9UQ88 MT-TN-201ENST00000387400 73 ntBASIC1.67□□□□□ -2.14
CDK11AQ9UQ88 MRPL35P3-201ENST00000421557 364 ntBASIC1.67□□□□□ -2.14
CDK11AQ9UQ88 SNORD79.1-201ENST00000516069 84 ntBASIC1.67□□□□□ -2.14
CDK11AQ9UQ88 RNU6-426P-201ENST00000516464 97 ntBASIC1.67□□□□□ -2.14
CDK11AQ9UQ88 MIR3133-201ENST00000583157 78 ntBASIC1.67□□□□□ -2.14
CDK11AQ9UQ88 AC012676.2-201ENST00000619258 186 ntBASIC1.67□□□□□ -2.14
CDK11AQ9UQ88 AC010332.2-201ENST00000613083 1904 ntBASIC1.66□□□□□ -2.14
CDK11AQ9UQ88 RNU6-690P-201ENST00000365242 106 ntBASIC1.66□□□□□ -2.14
CDK11AQ9UQ88 Y_RNA.430-201ENST00000384081 110 ntBASIC1.66□□□□□ -2.14
CDK11AQ9UQ88 MIR19B1-201ENST00000384829 87 ntBASIC1.66□□□□□ -2.14
CDK11AQ9UQ88 Y_RNA.686-201ENST00000516548 134 ntBASIC1.66□□□□□ -2.14
CDK11AQ9UQ88 TUG1_4.1-201ENST00000619464 181 ntBASIC1.66□□□□□ -2.14
CDK11AQ9UQ88 RNU6-349P-201ENST00000362402 107 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 Y_RNA.568-201ENST00000384742 113 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 SNORA26.6-201ENST00000391256 115 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 RNU6-613P-201ENST00000410412 108 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 AC063976.4-201ENST00000421971 163 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 HMGN1P33-201ENST00000432945 451 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 RNU7-90P-201ENST00000459216 62 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 RNU7-45P-201ENST00000459460 63 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 MIR4264-201ENST00000583520 66 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 MIR6516-201ENST00000630554 81 ntBASIC1.65□□□□□ -2.15
CDK11AQ9UQ88 RNU6-309P-201ENST00000364573 106 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 Y_RNA.363-201ENST00000365529 113 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 MIR7-2-201ENST00000384970 110 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 SNORA40-201ENST00000388090 126 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 RNU7-21P-201ENST00000459430 62 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 RNU5E-3P-201ENST00000515913 68 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 RNA5SP480-201ENST00000516840 109 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 HSPE1P19-201ENST00000603327 295 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 U7.2-201ENST00000607576 63 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 AL391516.1-201ENST00000554380 2449 ntBASIC1.64□□□□□ -2.15
CDK11AQ9UQ88 RNU6-774P-201ENST00000363238 107 ntBASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 SNORD50.2-201ENST00000365465 70 ntBASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 SNORA75.2-201ENST00000391138 150 ntBASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 SNORA75.3-201ENST00000391231 150 ntBASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 RNU6-1190P-201ENST00000410811 104 ntBASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 RNU6-602P-201ENST00000411155 105 ntBASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.63□□□□□ -2.15
CDK11AQ9UQ88 MIR377-201ENST00000362145 69 ntBASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 MIR373-201ENST00000362273 69 ntBASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 RNU4-16P-201ENST00000364737 141 ntBASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 AC133485.4-201ENST00000561835 220 ntBASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 AC138907.4-201ENST00000570107 226 ntBASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 MIR3121-201ENST00000579680 77 ntBASIC1.62□□□□□ -2.15
CDK11AQ9UQ88 SNORA22.1-201ENST00000362701 134 ntBASIC1.61□□□□□ -2.15
CDK11AQ9UQ88 AL022718.1-201ENST00000412004 84 ntBASIC1.61□□□□□ -2.15
CDK11AQ9UQ88 SNORD114-21-201ENST00000606412 72 ntBASIC1.61□□□□□ -2.15
CDK11AQ9UQ88 PVT1_3.1-201ENST00000620853 95 ntBASIC1.61□□□□□ -2.15
CDK11AQ9UQ88 AC090844.1-201ENST00000422019 156 ntBASIC1.6□□□□□ -2.15
CDK11AQ9UQ88 Y_RNA.651-201ENST00000459380 103 ntBASIC1.6□□□□□ -2.15
CDK11AQ9UQ88 RNU6-240P-201ENST00000516098 97 ntBASIC1.6□□□□□ -2.15
CDK11AQ9UQ88 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.6□□□□□ -2.15
CDK11AQ9UQ88 AC211469.2-201ENST00000605461 205 ntBASIC1.6□□□□□ -2.15
CDK11AQ9UQ88 MIR6857-201ENST00000613267 93 ntBASIC1.6□□□□□ -2.15
CDK11AQ9UQ88 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CDK11AQ9UQ88 AL603908.1-201ENST00000406098 201 ntBASIC1.59□□□□□ -2.15
CDK11AQ9UQ88 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.59□□□□□ -2.15
CDK11AQ9UQ88 UBL5P1-201ENST00000507979 193 ntBASIC1.59□□□□□ -2.15
CDK11AQ9UQ88 MIR6841-201ENST00000637129 72 ntBASIC1.59□□□□□ -2.15
CDK11AQ9UQ88 AC008163.1-202ENST00000636004 2889 ntBASIC1.59□□□□□ -2.16
CDK11AQ9UQ88 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 RNU6-647P-201ENST00000364243 107 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 RNU4-38P-201ENST00000364472 129 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 SNORD113.3-201ENST00000364630 78 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 MIR539-201ENST00000365690 78 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 MIR598-201ENST00000384868 97 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 MIR532-201ENST00000385025 91 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 SNORD111-201ENST00000408139 94 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 MIR1285-1-201ENST00000408593 84 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 RNA5SP272-201ENST00000516095 111 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 AC021443.1-201ENST00000604478 211 ntBASIC1.58□□□□□ -2.16
CDK11AQ9UQ88 SNORD114-26-201ENST00000363543 72 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 Y_RNA.168-201ENST00000363740 102 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 RNU6-654P-201ENST00000364373 107 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 SNORA2B-201ENST00000384583 137 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 RNU6-257P-201ENST00000410238 98 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 RNA5SP144-201ENST00000410846 116 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 AC244023.1-201ENST00000426884 112 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 MTND4LP9-201ENST00000427694 174 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 MIR4661-201ENST00000582720 75 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 MIR4305-201ENST00000583252 102 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 AC242498.1-201ENST00000604134 111 ntBASIC1.57□□□□□ -2.16
CDK11AQ9UQ88 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CDK11AQ9UQ88 RNU6-508P-201ENST00000363231 103 ntBASIC1.56□□□□□ -2.16
CDK11AQ9UQ88 Y_RNA.114-201ENST00000363265 113 ntBASIC1.56□□□□□ -2.16
CDK11AQ9UQ88 RNU6-704P-201ENST00000364162 103 ntBASIC1.56□□□□□ -2.16
CDK11AQ9UQ88 AC002429.1-201ENST00000437672 148 ntBASIC1.56□□□□□ -2.16
CDK11AQ9UQ88 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms