Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
SRPK3Q9UPE1 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
SRPK3Q9UPE1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
SRPK3Q9UPE1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.86□□□□□ -2.11
SRPK3Q9UPE1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 Y_RNA.281-201ENST00000364774 94 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 SNORD12C-201ENST00000386307 89 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 RNA5SP395-201ENST00000516567 118 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 MIR8055-201ENST00000610739 97 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 AL035470.1-201ENST00000622571 220 ntBASIC1.85□□□□□ -2.11
SRPK3Q9UPE1 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 Y_RNA.362-201ENST00000365518 110 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 MIR548D2-201ENST00000384955 97 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 RPS23P4-201ENST00000487908 423 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 AC113410.1-201ENST00000505029 247 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 MIR4679-2-201ENST00000578358 77 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 MIR548AO-201ENST00000579992 96 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 Z97988.1-201ENST00000637697 135 ntBASIC1.84□□□□□ -2.11
SRPK3Q9UPE1 AL589743.1-201ENST00000551932 2712 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 SNORA63.5-201ENST00000363548 123 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 RNU6-755P-201ENST00000364400 103 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.549-201ENST00000384657 102 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 AC003989.2-201ENST00000440224 169 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 RPL39P39-201ENST00000455840 151 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 AC079140.2-201ENST00000506193 142 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.681-201ENST00000516445 113 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 RNU7-6P-201ENST00000516845 62 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.85-201ENST00000363014 111 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 RNU6-153P-201ENST00000364422 104 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 RNU6-1107P-201ENST00000364817 104 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 AC009474.2-201ENST00000451383 136 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 RNU6-947P-201ENST00000516264 106 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 RNA5SP33-201ENST00000516687 98 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 MIR4422-201ENST00000581938 83 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 AL096861.1-201ENST00000610899 123 ntBASIC1.82□□□□□ -2.12
SRPK3Q9UPE1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.49-201ENST00000362714 112 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 SNORD115-2-201ENST00000362842 82 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 RNU6-392P-201ENST00000364926 101 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 SNORD115-20-201ENST00000365099 82 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 RNY1P4-201ENST00000384595 115 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 RNU1-78P-201ENST00000391248 165 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 MIR4303-201ENST00000581299 66 ntBASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.81□□□□□ -2.12
SRPK3Q9UPE1 Y_RNA.344-201ENST00000365381 112 ntBASIC1.8□□□□□ -2.12
SRPK3Q9UPE1 RNU4-69P-201ENST00000410677 143 ntBASIC1.8□□□□□ -2.12
SRPK3Q9UPE1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.8□□□□□ -2.12
SRPK3Q9UPE1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
SRPK3Q9UPE1 MIR548AE2-201ENST00000583456 67 ntBASIC1.8□□□□□ -2.12
SRPK3Q9UPE1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SRPK3Q9UPE1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SRPK3Q9UPE1 RNU6-602P-201ENST00000411155 105 ntBASIC1.79□□□□□ -2.12
SRPK3Q9UPE1 RNU7-95P-201ENST00000459222 64 ntBASIC1.79□□□□□ -2.12
SRPK3Q9UPE1 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
SRPK3Q9UPE1 AL512598.1-201ENST00000610158 273 ntBASIC1.79□□□□□ -2.12
SRPK3Q9UPE1 MIR8065-201ENST00000620577 100 ntBASIC1.79□□□□□ -2.12
SRPK3Q9UPE1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 SNORD38B-201ENST00000384690 67 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 SNORD77B-201ENST00000391112 67 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 AC090844.1-201ENST00000422019 156 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 AC245047.7-201ENST00000440265 293 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 RNU1-123P-201ENST00000458950 160 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 RPL39P34-201ENST00000477141 156 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 RPL30P7-201ENST00000479312 323 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 uc_338.28-201ENST00000612082 187 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 SNORD38B-202ENST00000625943 69 ntBASIC1.78□□□□□ -2.12
SRPK3Q9UPE1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
SRPK3Q9UPE1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SRPK3Q9UPE1 AC027119.1-201ENST00000440877 241 ntBASIC1.77□□□□□ -2.13
SRPK3Q9UPE1 AC087741.2-201ENST00000619415 172 ntBASIC1.77□□□□□ -2.13
SRPK3Q9UPE1 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
SRPK3Q9UPE1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRPK3Q9UPE1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRPK3Q9UPE1 SNORA25.3-201ENST00000363205 127 ntBASIC1.76□□□□□ -2.13
SRPK3Q9UPE1 Y_RNA.309-201ENST00000365046 111 ntBASIC1.76□□□□□ -2.13
SRPK3Q9UPE1 SNORA32-201ENST00000384072 121 ntBASIC1.76□□□□□ -2.13
SRPK3Q9UPE1 AL031737.1-201ENST00000450125 223 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms