Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 RNU1-78P-201ENST00000391248 165 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 RNU6-733P-201ENST00000410759 104 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 AL445685.2-201ENST00000422551 342 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 AC003989.2-201ENST00000440224 169 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 RPL39P39-201ENST00000455840 151 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 AC079140.2-201ENST00000506193 142 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 RNU6-904P-201ENST00000516206 101 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 RNU7-35P-201ENST00000517174 62 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 AC019176.1-201ENST00000518519 225 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 FAM71BP1-201ENST00000604431 523 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 PRELID3BP2-201ENST00000605362 201 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 AP001318.4-201ENST00000616637 121 ntBASIC2.24□□□□□ -2.05
BRPF3Q9ULD4 SNORA25.3-201ENST00000363205 127 ntBASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 SNORD48-201ENST00000364953 64 ntBASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 SNORA7.5-201ENST00000410672 110 ntBASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 AC245517.4-201ENST00000448601 281 ntBASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 RNA5SP445-201ENST00000515889 115 ntBASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
BRPF3Q9ULD4 SNORD114-1-201ENST00000362705 72 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 RNU6-1065P-201ENST00000384513 106 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 MIR605-201ENST00000385078 83 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 snoU13.25-201ENST00000458945 104 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 Y_RNA.694-201ENST00000516677 117 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 AP000942.3-201ENST00000603702 160 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
BRPF3Q9ULD4 Y_RNA.348-201ENST00000365403 103 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 Y_RNA.360-201ENST00000365512 102 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 RNU6-1237P-201ENST00000384777 107 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 MIR1302-7-201ENST00000408841 72 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 AL353813.1-201ENST00000440700 253 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 RNU6-109P-201ENST00000516364 107 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 RNU6-184P-201ENST00000516514 107 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 RNU6-521P-201ENST00000516663 105 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 DEFB131E-201ENST00000532329 154 ntBASIC2.21□□□□□ -2.06
BRPF3Q9ULD4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 Y_RNA.43-201ENST00000362670 111 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 RNU4-36P-201ENST00000364294 144 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 RNU6-679P-201ENST00000391003 106 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 AC244023.1-201ENST00000426884 112 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 RPS29P11-201ENST00000496507 171 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 RNU7-79P-201ENST00000516082 62 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 MIR4694-201ENST00000578534 80 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 MIR3937-201ENST00000580135 106 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 AC242498.1-201ENST00000604134 111 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.2□□□□□ -2.06
BRPF3Q9ULD4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 RNY3P2-201ENST00000362918 102 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 RNU6-1099P-201ENST00000363533 107 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 RNU6-396P-201ENST00000365369 105 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 RNU6-905P-201ENST00000384434 107 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 MIR577-201ENST00000385196 96 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 AL133373.1-201ENST00000497098 94 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 AC024614.2-201ENST00000577584 372 ntBASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.19□□□□□ -2.06
BRPF3Q9ULD4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.18□□□□□ -2.06
BRPF3Q9ULD4 AC027119.1-201ENST00000440877 241 ntBASIC2.18□□□□□ -2.06
BRPF3Q9ULD4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
BRPF3Q9ULD4 RNU7-2P-201ENST00000516096 62 ntBASIC2.18□□□□□ -2.06
BRPF3Q9ULD4 RNU6-970P-201ENST00000516312 107 ntBASIC2.18□□□□□ -2.06
BRPF3Q9ULD4 SNORA40.13-201ENST00000516379 120 ntBASIC2.18□□□□□ -2.06
BRPF3Q9ULD4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
BRPF3Q9ULD4 RNU6-640P-201ENST00000363693 105 ntBASIC2.17□□□□□ -2.06
BRPF3Q9ULD4 SNORD115-35-201ENST00000365122 82 ntBASIC2.17□□□□□ -2.06
BRPF3Q9ULD4 RNA5SP237-201ENST00000410414 113 ntBASIC2.17□□□□□ -2.06
BRPF3Q9ULD4 RPL30P7-201ENST00000479312 323 ntBASIC2.17□□□□□ -2.06
BRPF3Q9ULD4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.17□□□□□ -2.06
BRPF3Q9ULD4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 RNU6-832P-201ENST00000363319 107 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 RNU6-1255P-201ENST00000363434 112 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 MIR206-201ENST00000384872 86 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 SNORD67.1-201ENST00000516618 108 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 AP003716.2-201ENST00000528260 108 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 MIR3664-201ENST00000579074 99 ntBASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
BRPF3Q9ULD4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.15□□□□□ -2.07
BRPF3Q9ULD4 U8.13-201ENST00000390842 128 ntBASIC2.15□□□□□ -2.07
BRPF3Q9ULD4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.15□□□□□ -2.07
BRPF3Q9ULD4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.15□□□□□ -2.07
BRPF3Q9ULD4 AL512310.12-203ENST00000640543 90 ntBASIC2.15□□□□□ -2.07
BRPF3Q9ULD4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
BRPF3Q9ULD4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 RNY4P30-201ENST00000410216 95 ntBASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 snoU13.2-201ENST00000459201 104 ntBASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 SCARNA23-201ENST00000516060 130 ntBASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 MIR2115-201ENST00000516657 100 ntBASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 AC141846.1-201ENST00000568348 142 ntBASIC2.14□□□□□ -2.07
BRPF3Q9ULD4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
BRPF3Q9ULD4 MIR103A2-201ENST00000362154 78 ntBASIC2.13□□□□□ -2.07
BRPF3Q9ULD4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.13□□□□□ -2.07
BRPF3Q9ULD4 RNA5SP264-201ENST00000363115 107 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms