Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DEFB131E-201ENST00000532329 154 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 RNU4-36P-201ENST00000364294 144 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 RNU6-294P-201ENST00000364999 102 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 MIR488-201ENST00000365739 83 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.430-201ENST00000384081 110 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 RNU6-409P-201ENST00000384114 104 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 MIR518E-201ENST00000385252 88 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 MTATP8P2-201ENST00000435212 202 ntBASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.1□□□□□ -2.07
PDLIM7Q9NR12 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 RNY3P2-201ENST00000362918 102 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 RNU6-1099P-201ENST00000363533 107 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 RNU4-67P-201ENST00000364569 141 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 MIR605-201ENST00000385078 83 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 SNORD77B-201ENST00000391112 67 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 RNU6-733P-201ENST00000410759 104 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 RPS3AP1-201ENST00000413190 320 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 MIR1270-201ENST00000459320 83 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 MIR4303-201ENST00000581299 66 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 MIR8081-201ENST00000611533 95 ntBASIC2.09□□□□□ -2.07
PDLIM7Q9NR12 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
PDLIM7Q9NR12 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 SNORA32-201ENST00000384072 121 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 RNU6-616P-201ENST00000384353 107 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 SNORA7.5-201ENST00000410672 110 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 snoU13.16-201ENST00000459350 104 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 RNU7-43P-201ENST00000516554 64 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 MIR4764-201ENST00000580680 88 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 FAM71BP1-201ENST00000604431 523 ntBASIC2.08□□□□□ -2.08
PDLIM7Q9NR12 Y_RNA.93-201ENST00000363066 109 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 SNORA1.1-201ENST00000364671 133 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 Y_RNA.360-201ENST00000365512 102 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 MIR194-1-201ENST00000384892 85 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 RPS29P11-201ENST00000496507 171 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 SCARNA23-201ENST00000516060 130 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 RNU6-158P-201ENST00000517104 100 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 MIR8055-201ENST00000610739 97 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 AC008133.2-201ENST00000624540 351 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 MIR2052-201ENST00000636055 55 ntBASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM7Q9NR12 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 SNORD73B-201ENST00000364394 72 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 RNY1P7-201ENST00000384743 110 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 MIR520C-201ENST00000385005 87 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 MIR577-201ENST00000385196 96 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 MIR3198-2-201ENST00000577868 80 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 MIR4694-201ENST00000578534 80 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
PDLIM7Q9NR12 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 Y_RNA.107-201ENST00000363190 121 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 RNU6-832P-201ENST00000363319 107 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 RNU6-679P-201ENST00000391003 106 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 SNORA67.5-201ENST00000391036 107 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 Y_RNA.601-201ENST00000410500 113 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 AL353813.1-201ENST00000440700 253 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
PDLIM7Q9NR12 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
PDLIM7Q9NR12 MIR30A-201ENST00000385092 71 ntBASIC2.04□□□□□ -2.08
PDLIM7Q9NR12 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM7Q9NR12 RNU6-521P-201ENST00000516663 105 ntBASIC2.04□□□□□ -2.08
PDLIM7Q9NR12 MIR8074-201ENST00000615081 81 ntBASIC2.04□□□□□ -2.08
PDLIM7Q9NR12 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 Y_RNA.10-201ENST00000362371 110 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 Y_RNA.220-201ENST00000364244 109 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 RNU6-439P-201ENST00000384188 106 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 AC245047.7-201ENST00000440265 293 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 BX248123.2-201ENST00000606318 124 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 MALAT1.1-201ENST00000618249 95 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 Z97988.1-201ENST00000637697 135 ntBASIC2.03□□□□□ -2.08
PDLIM7Q9NR12 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 Y_RNA.342-201ENST00000365352 113 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 RNA5SP259-201ENST00000365541 109 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 RNU6-342P-201ENST00000384521 104 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 MIR653-201ENST00000385279 96 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 MIR1302-4-201ENST00000408701 150 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 AL161935.2-201ENST00000414627 60 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 RNU7-95P-201ENST00000459222 64 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 snoU13.18-201ENST00000459483 104 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 RNU6-322P-201ENST00000516010 103 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 RNU6-795P-201ENST00000516323 103 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms