Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNU6-243P-201ENST00000391140 107 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 RNU6-466P-201ENST00000391224 103 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 RNU6-587P-201ENST00000391282 106 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 RNU2-59P-201ENST00000410482 191 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 AC244023.1-201ENST00000426884 112 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 BX276092.1-201ENST00000427368 251 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 AC105272.1-201ENST00000438604 198 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 SNORD111.1-201ENST00000516421 86 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 AC242498.1-201ENST00000604134 111 ntBASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.81□□□□□ -1.96
PRDM9Q9NQV7 RNU6-208P-201ENST00000362431 107 ntBASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 Y_RNA.386-201ENST00000383913 105 ntBASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 RNU6-649P-201ENST00000384463 107 ntBASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 MIR588-201ENST00000384900 83 ntBASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 AC007318.2-201ENST00000620999 243 ntBASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.8□□□□□ -1.96
PRDM9Q9NQV7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 RNA5SP100-201ENST00000410903 110 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 RNA5SP59-201ENST00000410922 110 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 MIR4484-201ENST00000582855 83 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 MIR4264-201ENST00000583520 66 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 AL365361.1-201ENST00000566942 3481 ntBASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PRDM9Q9NQV7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 RNU6-132P-201ENST00000383863 107 ntBASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 AC015818.7-201ENST00000428754 109 ntBASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 SNORA59A-201ENST00000459326 152 ntBASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 RNA5SP445-201ENST00000515889 115 ntBASIC2.78□□□□□ -1.96
PRDM9Q9NQV7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.97
PRDM9Q9NQV7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
PRDM9Q9NQV7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRDM9Q9NQV7 SNORA44-201ENST00000384584 132 ntBASIC2.77□□□□□ -1.97
PRDM9Q9NQV7 MT-TF-201ENST00000387314 71 ntBASIC2.77□□□□□ -1.97
PRDM9Q9NQV7 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
PRDM9Q9NQV7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
PRDM9Q9NQV7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 MIR30D-201ENST00000362283 70 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 Y_RNA.205-201ENST00000364128 113 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 MIR516A2-201ENST00000384888 90 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 MIR194-1-201ENST00000384892 85 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 MIR516A1-201ENST00000385033 90 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 MT-TN-201ENST00000387400 73 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 DEFB122-202ENST00000569013 197 ntBASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRDM9Q9NQV7 AL161431.1-201ENST00000618966 4205 ntBASIC2.75□□□□□ -1.97
PRDM9Q9NQV7 Y_RNA.596-201ENST00000410462 109 ntBASIC2.75□□□□□ -1.97
PRDM9Q9NQV7 RNA5SP492-201ENST00000411330 114 ntBASIC2.75□□□□□ -1.97
PRDM9Q9NQV7 AC245517.4-201ENST00000448601 281 ntBASIC2.75□□□□□ -1.97
PRDM9Q9NQV7 PRELID3BP2-201ENST00000605362 201 ntBASIC2.75□□□□□ -1.97
PRDM9Q9NQV7 AC067747.1-201ENST00000608026 250 ntBASIC2.75□□□□□ -1.97
PRDM9Q9NQV7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 RNU6-396P-201ENST00000365369 105 ntBASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 RNU6-1165P-201ENST00000410119 107 ntBASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 SNORA31.17-201ENST00000516953 127 ntBASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 MIR6740-201ENST00000618268 113 ntBASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PRDM9Q9NQV7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 RNU6-53P-201ENST00000365367 106 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 MIR518E-201ENST00000385252 88 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 AC004965.1-201ENST00000413033 213 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 AL139132.1-201ENST00000431587 344 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 GTF3AP2-201ENST00000557014 266 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 YWHAEP2-201ENST00000580066 112 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 YWHAEP3-201ENST00000582767 121 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 AP000942.3-201ENST00000603702 160 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 U6.111-201ENST00000636093 83 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 AC009487.2-201ENST00000420969 6821 ntBASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRDM9Q9NQV7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PRDM9Q9NQV7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRDM9Q9NQV7 RNU6-203P-201ENST00000384038 104 ntBASIC2.72□□□□□ -1.97
PRDM9Q9NQV7 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
PRDM9Q9NQV7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
PRDM9Q9NQV7 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 RNU6-800P-201ENST00000384473 103 ntBASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 RNU6-540P-201ENST00000384622 101 ntBASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 SNORD30.1-201ENST00000391309 70 ntBASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 UBBP3-201ENST00000445497 241 ntBASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PRDM9Q9NQV7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 Y_RNA.12-201ENST00000362393 112 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms