Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU6-913P-201ENST00000390913 95 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 U8.16-201ENST00000391279 133 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 MIR1267-201ENST00000408723 78 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS11Q9H270 snoU13.27-201ENST00000459278 104 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 RNU7-34P-201ENST00000459394 64 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 AC108729.3-201ENST00000513484 108 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS11Q9H270 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VPS11Q9H270 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VPS11Q9H270 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS11Q9H270 Y_RNA.430-201ENST00000384081 110 ntBASIC2.05□□□□□ -2.08
VPS11Q9H270 MIR889-201ENST00000401280 79 ntBASIC2.05□□□□□ -2.08
VPS11Q9H270 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
VPS11Q9H270 SNORA44.1-201ENST00000517031 108 ntBASIC2.05□□□□□ -2.08
VPS11Q9H270 AL512310.12-203ENST00000640543 90 ntBASIC2.05□□□□□ -2.08
VPS11Q9H270 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VPS11Q9H270 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS11Q9H270 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS11Q9H270 Y_RNA.140-201ENST00000363474 103 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 SNORD115-27-201ENST00000364430 82 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 Y_RNA.316-201ENST00000365118 111 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS11Q9H270 SNORA24-201ENST00000384096 131 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 MIR516B2-201ENST00000385190 85 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 SNORD77B-201ENST00000391112 67 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 RNU4-53P-201ENST00000410828 140 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 MIR4439-201ENST00000583746 80 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS11Q9H270 RNU6-86P-201ENST00000606534 107 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 MIR6717-201ENST00000622747 73 ntBASIC2.04□□□□□ -2.08
VPS11Q9H270 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
VPS11Q9H270 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS11Q9H270 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS11Q9H270 RNU6-633P-201ENST00000362612 103 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 SNORD28B-201ENST00000390993 75 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 UBL5P3-201ENST00000475112 231 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 MIR4709-201ENST00000577272 72 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 MIR4298-201ENST00000584380 73 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 AC020891.4-201ENST00000605745 93 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 AL020996.3-201ENST00000606617 222 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 MIR4791-201ENST00000607666 84 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
VPS11Q9H270 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
VPS11Q9H270 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS11Q9H270 RNU6-833P-201ENST00000363486 107 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 Y_RNA.607-201ENST00000410597 98 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 RNA5SP168-201ENST00000516642 112 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 RNU6-958P-201ENST00000516995 106 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 AC096720.1-201ENST00000604441 183 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 MIR8074-201ENST00000615081 81 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS11Q9H270 MIR4662A-201ENST00000637499 67 ntBASIC2.02□□□□□ -2.09
VPS11Q9H270 RNU6-342P-201ENST00000384521 104 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 MIR34C-201ENST00000384831 77 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 MIR30A-201ENST00000385092 71 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS11Q9H270 Y_RNA.609-201ENST00000410669 89 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS11Q9H270 AC073261.1-201ENST00000429409 121 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 HMGN1P33-201ENST00000432945 451 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 RPS29P29-201ENST00000456396 171 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 SNORA28-201ENST00000606769 126 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
VPS11Q9H270 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
VPS11Q9H270 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2□□□□□ -2.09
VPS11Q9H270 RNU6-1244P-201ENST00000363614 108 ntBASIC2□□□□□ -2.09
VPS11Q9H270 Y_RNA.370-201ENST00000365589 108 ntBASIC2□□□□□ -2.09
VPS11Q9H270 MIR206-201ENST00000384872 86 ntBASIC2□□□□□ -2.09
VPS11Q9H270 RNU6-613P-201ENST00000410412 108 ntBASIC2□□□□□ -2.09
VPS11Q9H270 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
VPS11Q9H270 RNU7-2P-201ENST00000516096 62 ntBASIC2□□□□□ -2.09
VPS11Q9H270 MIR3198-2-201ENST00000577868 80 ntBASIC2□□□□□ -2.09
VPS11Q9H270 MIR3152-201ENST00000579801 74 ntBASIC2□□□□□ -2.09
VPS11Q9H270 MIR4712-201ENST00000583750 82 ntBASIC2□□□□□ -2.09
VPS11Q9H270 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS11Q9H270 RNU6-1229P-201ENST00000364295 107 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 RNU6-524P-201ENST00000384270 107 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 AC093850.1-201ENST00000454121 251 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 RNU7-73P-201ENST00000458743 63 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 RN7SL429P-201ENST00000479090 223 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 RN7SL489P-201ENST00000486185 223 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 RN7SL327P-201ENST00000488659 223 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 MIR548AR-201ENST00000582191 57 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 RN7SL853P-201ENST00000617250 223 ntBASIC1.99□□□□□ -2.09
VPS11Q9H270 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
VPS11Q9H270 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
VPS11Q9H270 RNU6-1031P-201ENST00000384773 107 ntBASIC1.98□□□□□ -2.09
VPS11Q9H270 MIR526A1-201ENST00000384897 85 ntBASIC1.98□□□□□ -2.09
VPS11Q9H270 RNU7-67P-201ENST00000459003 62 ntBASIC1.98□□□□□ -2.09
VPS11Q9H270 RNU7-53P-201ENST00000516705 60 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms