Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 PRELID3BP2-201ENST00000605362 201 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 U1.36-201ENST00000620684 176 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 AC073325.2-201ENST00000339545 159 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 Y_RNA.36-201ENST00000362602 112 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 RNU6-957P-201ENST00000363652 99 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 SNORD115-31-201ENST00000365318 82 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 RNU6-53P-201ENST00000365367 106 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 SNORD67-201ENST00000390833 111 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 RNA5SP171-201ENST00000391071 115 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 SNORD111.1-201ENST00000516421 86 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 RNU7-156P-201ENST00000517214 74 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 AC026403.1-201ENST00000518938 295 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 AL161756.2-201ENST00000604597 246 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 AC007318.2-201ENST00000620999 243 ntBASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSBP4Q9BWG4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 RNU6-396P-201ENST00000365369 105 ntBASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 RNU7-106P-201ENST00000459514 67 ntBASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 MIR92B-201ENST00000607575 96 ntBASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 MIR6740-201ENST00000618268 113 ntBASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 AL365361.1-201ENST00000566942 3481 ntBASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SSBP4Q9BWG4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 MIR30D-201ENST00000362283 70 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNA5SP50-201ENST00000363731 107 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNU1-33P-201ENST00000364249 162 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 SNORA62.3-201ENST00000365110 153 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNY4P3-201ENST00000365254 95 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 MIR653-201ENST00000385279 96 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNU6-360P-201ENST00000390944 104 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 SNORD90-201ENST00000391145 111 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 MIR942-201ENST00000401111 86 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNU6-1165P-201ENST00000410119 107 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNU4-47P-201ENST00000410876 114 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 SNORD63B-201ENST00000411005 70 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 MIR4264-201ENST00000583520 66 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 MIR3922-201ENST00000585192 84 ntBASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SSBP4Q9BWG4 RNU4-58P-201ENST00000363192 141 ntBASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 Y_RNA.371-201ENST00000365591 113 ntBASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 MIR670-201ENST00000390142 98 ntBASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 AC005520.4-201ENST00000604337 90 ntBASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
SSBP4Q9BWG4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 Y_RNA.42-201ENST00000362660 108 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 RNU6-1051P-201ENST00000365471 102 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 RNU6-895P-201ENST00000384125 103 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 RNU6-154P-201ENST00000384306 106 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 MT-TF-201ENST00000387314 71 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 RPS29P4-201ENST00000414733 161 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 AL139132.1-201ENST00000431587 344 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 snoU13.17-201ENST00000458802 104 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 AC003982.1-202ENST00000469928 248 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 RNU6-531P-201ENST00000516694 104 ntBASIC2.17□□□□□ -2.06
SSBP4Q9BWG4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU4-82P-201ENST00000362443 140 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 SNORA71.3-201ENST00000362582 128 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU6-330P-201ENST00000363015 107 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU6-681P-201ENST00000364012 104 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 Y_RNA.207-201ENST00000364142 106 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU6-630P-201ENST00000391258 106 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 AC244636.1-201ENST00000421152 228 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU7-62P-201ENST00000458856 62 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RN7SL863P-201ENST00000462370 296 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 RNU6-1194P-201ENST00000516208 104 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 MIR6075-201ENST00000620782 95 ntBASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SSBP4Q9BWG4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SSBP4Q9BWG4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.15□□□□□ -2.06
SSBP4Q9BWG4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.15□□□□□ -2.07
SSBP4Q9BWG4 MIR22-201ENST00000362190 85 ntBASIC2.15□□□□□ -2.07
SSBP4Q9BWG4 RNU6-340P-201ENST00000364005 107 ntBASIC2.15□□□□□ -2.07
SSBP4Q9BWG4 Y_RNA.239-201ENST00000364444 113 ntBASIC2.15□□□□□ -2.07
SSBP4Q9BWG4 DEFA7P-201ENST00000382676 285 ntBASIC2.15□□□□□ -2.07
SSBP4Q9BWG4 MIR490-201ENST00000384865 128 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms