Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC113410.1-201ENST00000505029 247 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 RNU6-426P-201ENST00000516464 97 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 MIR4305-201ENST00000583252 102 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 AL359821.1-201ENST00000605519 182 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
NPAS1Q99742 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
NPAS1Q99742 Y_RNA.327-201ENST00000365201 102 ntBASIC1.07□□□□□ -2.24
NPAS1Q99742 RNU6-1062P-201ENST00000383908 107 ntBASIC1.07□□□□□ -2.24
NPAS1Q99742 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
NPAS1Q99742 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.07□□□□□ -2.24
NPAS1Q99742 MIR1-1-201ENST00000362147 71 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 RNU6-774P-201ENST00000363238 107 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 Y_RNA.506-201ENST00000384494 102 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 MIR100-201ENST00000385259 80 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 SNORD89-201ENST00000390981 114 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 SNORD83.1-201ENST00000411362 77 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.06□□□□□ -2.24
NPAS1Q99742 snoU13.2-201ENST00000459201 104 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 RNU7-164P-201ENST00000459221 62 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 AC108729.3-201ENST00000513484 108 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 AC010332.2-201ENST00000613083 1904 ntBASIC1.06□□□□□ -2.24
NPAS1Q99742 Y_RNA.171-201ENST00000363760 102 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 RNU6-1165P-201ENST00000410119 107 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 RNA5SP144-201ENST00000410846 116 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 AL137067.1-201ENST00000615933 120 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 MIR6740-201ENST00000618268 113 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 AP001340.1-201ENST00000624405 217 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 AC091895.1-201ENST00000624494 256 ntBASIC1.05□□□□□ -2.24
NPAS1Q99742 Y_RNA.366-201ENST00000365540 102 ntBASIC1.04□□□□□ -2.24
NPAS1Q99742 POLR2J4-204ENST00000418424 324 ntBASIC1.04□□□□□ -2.24
NPAS1Q99742 TRMT112P2-201ENST00000512910 132 ntBASIC1.04□□□□□ -2.24
NPAS1Q99742 RNA5SP33-201ENST00000516687 98 ntBASIC1.04□□□□□ -2.24
NPAS1Q99742 MIR3133-201ENST00000583157 78 ntBASIC1.04□□□□□ -2.24
NPAS1Q99742 AL136317.1-201ENST00000612653 226 ntBASIC1.04□□□□□ -2.24
NPAS1Q99742 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
NPAS1Q99742 RNU6-580P-201ENST00000365159 107 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 RNY1P5-201ENST00000383890 115 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 SNORA18-201ENST00000384416 132 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 SNORA40-201ENST00000388090 126 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 snoU13.21-201ENST00000459368 105 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 RNU6-1053P-201ENST00000515930 101 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 MIR4771-2-201ENST00000577758 74 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 MIR3121-201ENST00000579680 77 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 MIR4771-1-201ENST00000582617 74 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 U7.2-201ENST00000607576 63 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 TUG1_4.1-201ENST00000619464 181 ntBASIC1.03□□□□□ -2.24
NPAS1Q99742 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
NPAS1Q99742 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.03□□□□□ -2.24
NPAS1Q99742 AC023934.1-201ENST00000574529 2389 ntBASIC1.03□□□□□ -2.25
NPAS1Q99742 Y_RNA.114-201ENST00000363265 113 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 Y_RNA.294-201ENST00000364916 102 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 AL512326.2-201ENST00000426359 151 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 AC015818.7-201ENST00000428754 109 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 AC087499.7-201ENST00000441958 109 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 PDCD5P2-201ENST00000507570 312 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 RNU6-977P-201ENST00000516411 103 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 MIR6078-201ENST00000611069 100 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 MIR6841-201ENST00000637129 72 ntBASIC1.02□□□□□ -2.25
NPAS1Q99742 RNU6-647P-201ENST00000364243 107 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 RNU6-392P-201ENST00000364926 101 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 SNORA32-201ENST00000384072 121 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 MIR548M-201ENST00000408260 86 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 RPS26P5-201ENST00000418544 335 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 MIR18B-201ENST00000454574 71 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
NPAS1Q99742 Y_RNA.703-201ENST00000516846 111 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 RNU6-1258P-201ENST00000516911 111 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 AC004812.1-201ENST00000540773 146 ntBASIC1.01□□□□□ -2.25
NPAS1Q99742 RNU6-342P-201ENST00000384521 104 ntBASIC1□□□□□ -2.25
NPAS1Q99742 Y_RNA.531-201ENST00000384589 121 ntBASIC1□□□□□ -2.25
NPAS1Q99742 Y_RNA.568-201ENST00000384742 113 ntBASIC1□□□□□ -2.25
NPAS1Q99742 RNU6-1086P-201ENST00000410930 100 ntBASIC1□□□□□ -2.25
NPAS1Q99742 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1□□□□□ -2.25
NPAS1Q99742 RNU6-1211P-201ENST00000459179 105 ntBASIC1□□□□□ -2.25
NPAS1Q99742 RNU2-35P-201ENST00000516446 142 ntBASIC1□□□□□ -2.25
NPAS1Q99742 AC108081.1-201ENST00000604358 221 ntBASIC1□□□□□ -2.25
NPAS1Q99742 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1□□□□□ -2.25
NPAS1Q99742 Y_RNA.298-201ENST00000364960 107 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 MIR1257-201ENST00000408490 117 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 SNORD93-201ENST00000408813 74 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 U7.7-201ENST00000459276 60 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 uc_338.6-201ENST00000613544 171 ntBASIC0.99□□□□□ -2.25
NPAS1Q99742 AL662814.1-201ENST00000617364 121 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms