Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPS3AP1-201ENST00000413190 320 ntBASIC1.59□□□□□ -2.15
PNKPQ96T60 RNU7-113P-201ENST00000459273 62 ntBASIC1.59□□□□□ -2.15
PNKPQ96T60 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
PNKPQ96T60 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.59□□□□□ -2.15
PNKPQ96T60 Y_RNA.81-201ENST00000362997 102 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 Y_RNA.430-201ENST00000384081 110 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 Y_RNA.470-201ENST00000384307 117 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
PNKPQ96T60 RNU6-589P-201ENST00000516485 107 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 Y_RNA.709-201ENST00000516952 92 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 AC007012.1-201ENST00000567192 175 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 Z97988.1-201ENST00000637697 135 ntBASIC1.58□□□□□ -2.16
PNKPQ96T60 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PNKPQ96T60 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PNKPQ96T60 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PNKPQ96T60 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 Y_RNA.549-201ENST00000384657 102 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 MIR759-201ENST00000390224 91 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 RNY4P18-201ENST00000391107 89 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 RNU6-602P-201ENST00000411155 105 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 RNU6-893P-201ENST00000458841 100 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 RNA5SP445-201ENST00000515889 115 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
PNKPQ96T60 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
PNKPQ96T60 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 MIR1302-7-201ENST00000408841 72 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
PNKPQ96T60 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.56□□□□□ -2.16
PNKPQ96T60 RPS23P4-201ENST00000487908 423 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 AC113410.1-201ENST00000505029 247 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 RNA5SP33-201ENST00000516687 98 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 RNU7-6P-201ENST00000516845 62 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 RNU6-165P-201ENST00000517170 99 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 PRELID3BP2-201ENST00000605362 201 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 MIR8065-201ENST00000620577 100 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
PNKPQ96T60 SNORD33-201ENST00000362761 85 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 Y_RNA.226-201ENST00000364337 114 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 RNU6-1065P-201ENST00000384513 106 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 RNU6-880P-201ENST00000384526 107 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 RPS27P16-201ENST00000425758 201 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 RPL39P39-201ENST00000455840 151 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 AL512310.8-201ENST00000550183 120 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 AL035470.1-201ENST00000622571 220 ntBASIC1.55□□□□□ -2.16
PNKPQ96T60 SNORA63.4-201ENST00000362763 126 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 RNY4P6-201ENST00000363667 96 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 SNORA7.1-201ENST00000363750 139 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 SNORA22-201ENST00000383907 134 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
PNKPQ96T60 AC063976.4-201ENST00000421971 163 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 MIR3163-201ENST00000581592 73 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 MIR548AE2-201ENST00000583456 67 ntBASIC1.54□□□□□ -2.16
PNKPQ96T60 SNORD115-2-201ENST00000362842 82 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 SNORD115-20-201ENST00000365099 82 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 Y_RNA.362-201ENST00000365518 110 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 AL133373.1-201ENST00000497098 94 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
PNKPQ96T60 SNORA63.5-201ENST00000363548 123 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 Y_RNA.344-201ENST00000365381 112 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 SNORA32-201ENST00000384072 121 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 RNU6-342P-201ENST00000384521 104 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 MIR548D2-201ENST00000384955 97 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 SNORD12C-201ENST00000386307 89 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PNKPQ96T60 MIR1287-201ENST00000408492 90 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 RNU4-69P-201ENST00000410677 143 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 AC244023.1-201ENST00000426884 112 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.52□□□□□ -2.17
PNKPQ96T60 MIR1270-201ENST00000459320 83 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 MIR4422-201ENST00000581938 83 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.52□□□□□ -2.17
PNKPQ96T60 AC242498.1-201ENST00000604134 111 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 AC087741.2-201ENST00000619415 172 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
PNKPQ96T60 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
PNKPQ96T60 Y_RNA.354-201ENST00000365448 111 ntBASIC1.51□□□□□ -2.17
PNKPQ96T60 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
PNKPQ96T60 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
PNKPQ96T60 AC068338.1-201ENST00000565567 176 ntBASIC1.51□□□□□ -2.17
PNKPQ96T60 MIR4679-2-201ENST00000578358 77 ntBASIC1.51□□□□□ -2.17
PNKPQ96T60 MIR8070-201ENST00000616510 88 ntBASIC1.51□□□□□ -2.17
PNKPQ96T60 Y_RNA.281-201ENST00000364774 94 ntBASIC1.5□□□□□ -2.17
PNKPQ96T60 Y_RNA.299-201ENST00000364973 94 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms