Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 Y_RNA.312-201ENST00000365089 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.322-201ENST00000365151 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 SNORA72.6-201ENST00000384520 129 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 RNU6-651P-201ENST00000411040 105 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.650-201ENST00000459002 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 SNORA31.14-201ENST00000516728 116 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 RNU6-135P-201ENST00000516769 101 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.777-201ENST00000516982 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.771-201ENST00000598668 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 U2.14-201ENST00000615943 113 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 SNORA22.1-201ENST00000362701 134 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 Y_RNA.535-201ENST00000384612 99 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 RNA5SP63-201ENST00000391225 112 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 SNORA79-201ENST00000408376 140 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 AL358176.2-201ENST00000425769 204 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 SUMO1P3-201ENST00000439961 304 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 MIR4491-201ENST00000581087 68 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 AL365205.2-201ENST00000594586 68 ntBASIC0.02□□□□□ -2.41
VPS35Q96QK1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 Y_RNA.237-201ENST00000364439 102 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 RNU6-716P-201ENST00000365621 103 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 RNU6-949P-201ENST00000384040 107 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 RNU6-381P-201ENST00000391259 108 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 AC096949.1-201ENST00000412047 152 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 MTND4LP11-201ENST00000422184 280 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 SEPT7P4-201ENST00000437076 306 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 AC069271.1-201ENST00000445577 156 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 TRBVB-201ENST00000477100 408 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 RNA5SP227-201ENST00000516184 113 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 RNU6-1137P-201ENST00000517073 99 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 MIR6755-201ENST00000619993 66 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 AC021613.1-201ENST00000623880 111 ntBASIC0.01□□□□□ -2.41
VPS35Q96QK1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
VPS35Q96QK1 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 Y_RNA.258-201ENST00000364613 105 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 RNU6-291P-201ENST00000384720 107 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 RNU6-561P-201ENST00000516222 102 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 RNU7-70P-201ENST00000516941 66 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 AC020661.2-201ENST00000560114 134 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 MIR6828-201ENST00000636181 60 ntBASIC0□□□□□ -2.41
VPS35Q96QK1 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 RNU6-728P-201ENST00000365375 104 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 RNU4-17P-201ENST00000365598 141 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 AL117351.2-201ENST00000513571 157 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 AL365265.1-201ENST00000621045 234 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
VPS35Q96QK1 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 SNORA18-201ENST00000384416 132 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 RNU6-535P-201ENST00000384722 107 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 RNA5SP127-201ENST00000411051 133 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS35Q96QK1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 RNA5SP330-201ENST00000517096 96 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 RNA5SP47-201ENST00000517230 109 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 AL442663.2-201ENST00000554385 511 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 MTND5P34-201ENST00000568888 325 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 AC091304.10-201ENST00000641554 121 ntBASIC-0.02□□□□□ -2.41
VPS35Q96QK1 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 RNU6-713P-201ENST00000384761 107 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 PCNPP3-201ENST00000393579 471 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 RNU6-985P-201ENST00000410182 104 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 RNU4-43P-201ENST00000410628 137 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 AL442067.1-201ENST00000613261 223 ntBASIC-0.03□□□□□ -2.41
VPS35Q96QK1 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
VPS35Q96QK1 SNORD28-201ENST00000384706 75 ntBASIC-0.04□□□□□ -2.42
VPS35Q96QK1 SNORA25.16-201ENST00000516741 121 ntBASIC-0.04□□□□□ -2.42
VPS35Q96QK1 MIR4282-201ENST00000583613 67 ntBASIC-0.04□□□□□ -2.42
VPS35Q96QK1 MIR4639-201ENST00000584938 69 ntBASIC-0.04□□□□□ -2.42
VPS35Q96QK1 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 RNU4-16P-201ENST00000364737 141 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 RNY1P13-201ENST00000365030 105 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 RNU6-187P-201ENST00000384139 106 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 MIR1197-201ENST00000408818 88 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 MIR6779-201ENST00000617283 64 ntBASIC-0.05□□□□□ -2.42
VPS35Q96QK1 MIR335-201ENST00000362173 94 ntBASIC-0.06□□□□□ -2.42
VPS35Q96QK1 RNA5SP457-201ENST00000363657 124 ntBASIC-0.06□□□□□ -2.42
VPS35Q96QK1 RNU6-103P-201ENST00000363686 107 ntBASIC-0.06□□□□□ -2.42
VPS35Q96QK1 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 321.5 ms