Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 SNORD115-35-201ENST00000365122 82 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 MIR488-201ENST00000365739 83 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 HSPE1P24-201ENST00000450782 238 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNU7-2P-201ENST00000516096 62 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 AL512310.12-203ENST00000640543 90 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU6-49P-201ENST00000384256 107 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU7-79P-201ENST00000516082 62 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNU6-294P-201ENST00000364999 102 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 MIR206-201ENST00000384872 86 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 AP000553.5-201ENST00000641933 54 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU6-947P-201ENST00000516264 106 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU6-795P-201ENST00000516323 103 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 SNORD67.1-201ENST00000516618 108 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 AL442128.1-201ENST00000615151 90 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 MALAT1.1-201ENST00000618249 95 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 MIR7843-201ENST00000622274 79 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU6-170P-201ENST00000362832 104 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 SNORD45B-201ENST00000364617 72 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP237-201ENST00000410414 113 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC004941.2-201ENST00000427009 228 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 RPL39P39-201ENST00000455840 151 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC108729.3-201ENST00000513484 108 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 SNORA72.7-201ENST00000516349 94 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC012531.4-201ENST00000616509 177 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 SNORA25.3-201ENST00000363205 127 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 MIR1302-7-201ENST00000408841 72 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AC244023.1-201ENST00000426884 112 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AC242498.1-201ENST00000604134 111 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AC096720.1-201ENST00000604441 183 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 SNORD114-10-201ENST00000363409 72 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNY1P7-201ENST00000384743 110 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 AC096949.1-201ENST00000412047 152 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNU7-137P-201ENST00000516788 62 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNY1P13-201ENST00000365030 105 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNU6-396P-201ENST00000365369 105 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 snoU13.25-201ENST00000458945 104 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 UBL5P1-201ENST00000507979 193 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNU7-61P-201ENST00000515897 61 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 AC141846.1-201ENST00000568348 142 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 MIR548Z-201ENST00000584743 97 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms