Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-1292P-201ENST00000383856 107 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 RNU6-472P-201ENST00000384299 107 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 MIR644A-201ENST00000385262 94 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 RNU6-985P-201ENST00000410182 104 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 RPL39P25-201ENST00000449384 154 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.701-201ENST00000516812 110 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 AC091932.4-201ENST00000623386 200 ntBASIC0.16□□□□□ -2.38
ZNF560Q96MR9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.76-201ENST00000362931 109 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.416-201ENST00000384014 113 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
ZNF560Q96MR9 U8.15-201ENST00000390947 134 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 RNU6-1109P-201ENST00000391187 107 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 AL358176.2-201ENST00000425769 204 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.15□□□□□ -2.39
ZNF560Q96MR9 TRBVB-201ENST00000477100 408 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 RNU6-469P-201ENST00000516253 101 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 RNY3P16-201ENST00000516338 101 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 AL365265.1-201ENST00000621045 234 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 MIR6841-201ENST00000637129 72 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
ZNF560Q96MR9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 RNU4-16P-201ENST00000364737 141 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.396-201ENST00000383949 103 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 AL512326.2-201ENST00000426359 151 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 RNU6-1258P-201ENST00000516911 111 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 MIR4282-201ENST00000583613 67 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 MIR8087-201ENST00000612745 78 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 MTND5P32-201ENST00000560711 1802 ntBASIC0.14□□□□□ -2.39
ZNF560Q96MR9 AL596211.1-201ENST00000569873 2277 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 RNU6-1336P-201ENST00000383886 109 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 SNORA79-201ENST00000408376 140 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.604-201ENST00000410574 102 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 AC141846.1-201ENST00000568348 142 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 MTND5P34-201ENST00000568888 325 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 AL365205.2-201ENST00000594586 68 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
ZNF560Q96MR9 MIR335-201ENST00000362173 94 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-797P-201ENST00000363101 109 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-238P-201ENST00000363313 106 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.176-201ENST00000363815 109 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-978P-201ENST00000364371 103 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-728P-201ENST00000365375 104 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-187P-201ENST00000384139 106 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 MIR548F4-201ENST00000408515 105 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 SEPT7P4-201ENST00000437076 306 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-635P-201ENST00000516651 102 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 SNORA25.16-201ENST00000516741 121 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 SCARNA15-202ENST00000516881 127 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNU6-765P-201ENST00000516916 99 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 RNA5SP330-201ENST00000517096 96 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 MIR7107-201ENST00000611489 80 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 MIR6082-201ENST00000613604 109 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.461-201ENST00000384263 103 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 SNORA20-201ENST00000384662 132 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 RNU6-291P-201ENST00000384720 107 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.590-201ENST00000410140 107 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 RNU4-43P-201ENST00000410628 137 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 RNU2-38P-201ENST00000410856 79 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 AC108059.2-201ENST00000434626 151 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.11□□□□□ -2.39
ZNF560Q96MR9 SNORA31.14-201ENST00000516728 116 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 RNU6-135P-201ENST00000516769 101 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 AP003072.1-201ENST00000531740 145 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 AC112693.2-201ENST00000556538 232 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 MIR8062-201ENST00000621515 85 ntBASIC0.11□□□□□ -2.39
ZNF560Q96MR9 SNORA22.1-201ENST00000362701 134 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNU6-403P-201ENST00000363163 104 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNA5SP245-201ENST00000364239 121 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 Y_RNA.277-201ENST00000364754 102 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNU4-17P-201ENST00000365598 141 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNU6-639P-201ENST00000384074 107 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 SUMO1P3-201ENST00000439961 304 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 AC069271.1-201ENST00000445577 156 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNA5SP268-201ENST00000516828 124 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 MIR4491-201ENST00000581087 68 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 AC021613.1-201ENST00000623880 111 ntBASIC0.1□□□□□ -2.39
ZNF560Q96MR9 RNY1P13-201ENST00000365030 105 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 RNU6-1227P-201ENST00000383981 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms