Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPL23AP6-201ENST00000446637 472 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 HSPE1P24-201ENST00000450782 238 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 RNU7-12P-201ENST00000516030 62 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 SNORA31.10-201ENST00000516482 106 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AC133485.1-201ENST00000567176 124 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AL356280.1-201ENST00000603614 379 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.36-201ENST00000362602 112 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 SNORA38-201ENST00000363946 132 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNY1P13-201ENST00000365030 105 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.491-201ENST00000384417 107 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 MIR1289-2-201ENST00000408360 111 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 snoU13.16-201ENST00000459350 104 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 SNORD123-201ENST00000459473 70 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNA5SP168-201ENST00000516642 112 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNU6-850P-201ENST00000516934 103 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 YWHAEP2-201ENST00000580066 112 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 YWHAEP3-201ENST00000582767 121 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 SNORD14A-201ENST00000606526 91 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM47Q96LD4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM47Q96LD4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM47Q96LD4 SNORD114-30-201ENST00000364448 72 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 RNU6-1237P-201ENST00000384777 107 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 AL591806.2-201ENST00000433122 173 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 AL603825.1-201ENST00000438481 80 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 RNA5SP320-201ENST00000516263 124 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 Y_RNA.676-201ENST00000516393 96 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM47Q96LD4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM47Q96LD4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM47Q96LD4 RNU6-895P-201ENST00000384125 103 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 Y_RNA.537-201ENST00000384626 109 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 SNORD90-201ENST00000391145 111 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 MIR942-201ENST00000401111 86 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 RN7SKP223-201ENST00000410582 62 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 Z97988.1-201ENST00000637697 135 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TRIM47Q96LD4 AL161722.3-201ENST00000605789 2983 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
TRIM47Q96LD4 RNY1P2-201ENST00000364820 117 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 RNU6-1072P-201ENST00000384703 107 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 RNU6-443P-201ENST00000384780 107 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 MIR548U-201ENST00000390728 81 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 HSPE1P9-201ENST00000440046 311 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 UBBP3-201ENST00000445497 241 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 RPS27P21-201ENST00000486977 252 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 AL355297.2-201ENST00000604792 129 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM47Q96LD4 RNU6-154P-201ENST00000384306 106 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 AL034345.1-201ENST00000407768 123 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 AC018868.1-201ENST00000491307 315 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 RNU6-75P-201ENST00000515944 104 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM47Q96LD4 MIR4511-201ENST00000582784 87 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM47Q96LD4 MIR561-201ENST00000385216 97 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 RNU6-977P-201ENST00000516411 103 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 MIR4500-201ENST00000579472 76 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 MIR4635-201ENST00000583759 79 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 AC103706.3-201ENST00000636297 85 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 MIR7515-201ENST00000637837 67 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TRIM47Q96LD4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNU6-681P-201ENST00000364012 104 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNA5SP493-201ENST00000364115 91 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 Y_RNA.283-201ENST00000364798 112 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 SNORD45A-201ENST00000384512 84 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 MIR27B-201ENST00000385129 97 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AC110620.1-201ENST00000416042 228 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AL356320.1-201ENST00000429616 163 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNU6-548P-201ENST00000517083 115 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AL357312.1-201ENST00000603879 298 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AC069114.2-201ENST00000604699 304 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
TRIM47Q96LD4 MIRLET7F1-201ENST00000362202 87 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 MIR337-201ENST00000362281 93 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 SNORA68.1-201ENST00000364537 132 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 RNU6-669P-201ENST00000365575 107 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM47Q96LD4 SNORA11.4-201ENST00000408823 129 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 AC027119.1-201ENST00000440877 241 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 CYP3A52P-201ENST00000563326 91 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 SNORD92-201ENST00000585078 85 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms