Protein–RNA interactions for Protein: Q96FF7

MISP3, Uncharacterized protein MISP3, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MISP3Q96FF7 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
MISP3Q96FF7 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
MISP3Q96FF7 MIR4635-201ENST00000583759 79 ntBASIC2.14□□□□□ -2.07
MISP3Q96FF7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.14□□□□□ -2.07
MISP3Q96FF7 Y_RNA.788-201ENST00000622394 112 ntBASIC2.14□□□□□ -2.07
MISP3Q96FF7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MISP3Q96FF7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MISP3Q96FF7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MISP3Q96FF7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MISP3Q96FF7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MISP3Q96FF7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.13□□□□□ -2.07
MISP3Q96FF7 HSBP1P2-201ENST00000299671 229 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 Y_RNA.57-201ENST00000362806 113 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 RNU6-788P-201ENST00000390967 104 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 RNA5SP210-201ENST00000391034 120 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 BX276092.1-201ENST00000427368 251 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 AC087499.2-201ENST00000432861 149 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 SNORD4B-201ENST00000459083 72 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
MISP3Q96FF7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MISP3Q96FF7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MISP3Q96FF7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
MISP3Q96FF7 RNU6-129P-201ENST00000391022 107 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 AL138827.1-201ENST00000402666 306 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 MIR1236-201ENST00000408340 102 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.12□□□□□ -2.07
MISP3Q96FF7 AC244023.1-201ENST00000426884 112 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 RNU7-85P-201ENST00000458851 63 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 AC138749.4-201ENST00000563970 127 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 MIR3200-201ENST00000580767 85 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 MIR4325-201ENST00000583049 90 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 AC242498.1-201ENST00000604134 111 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 MIR8066-201ENST00000617280 78 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 U6.109-201ENST00000636749 87 ntBASIC2.12□□□□□ -2.07
MISP3Q96FF7 RNU6-949P-201ENST00000384040 107 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 AL139132.1-201ENST00000431587 344 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 AC004223.1-201ENST00000479840 271 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 SNORD111.1-201ENST00000516421 86 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 AC006023.1-201ENST00000603944 259 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 U7.4-201ENST00000614961 63 ntBASIC2.11□□□□□ -2.07
MISP3Q96FF7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MISP3Q96FF7 SNORA25.3-201ENST00000363205 127 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 RNY1P2-201ENST00000364820 117 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 Z98742.3-201ENST00000418637 326 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 RNU6-850P-201ENST00000516934 103 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 AP000753.3-201ENST00000604083 169 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.1□□□□□ -2.07
MISP3Q96FF7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.1□□□□□ -2.07
MISP3Q96FF7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
MISP3Q96FF7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
MISP3Q96FF7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.07
MISP3Q96FF7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 RNA5SP259-201ENST00000365541 109 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 SNORA9-201ENST00000384215 133 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 MIR588-201ENST00000384900 83 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 SNRPGP12-201ENST00000449481 213 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 AC005908.1-201ENST00000468701 347 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.09□□□□□ -2.07
MISP3Q96FF7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.09□□□□□ -2.07
MISP3Q96FF7 RNU6-922P-201ENST00000516753 99 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 MIR3192-201ENST00000584920 77 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 PRELID3BP2-201ENST00000605362 201 ntBASIC2.09□□□□□ -2.07
MISP3Q96FF7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.08□□□□□ -2.08
MISP3Q96FF7 RNU6-315P-201ENST00000362666 107 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 RNU1-112P-201ENST00000364401 164 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 RNU1-51P-201ENST00000365345 176 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 RNA5SP21-201ENST00000410917 96 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 AC004965.1-201ENST00000413033 213 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 snoU13.2-201ENST00000459201 104 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 snoU13.11-201ENST00000459219 104 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 RNU6-322P-201ENST00000516010 103 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
MISP3Q96FF7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.08□□□□□ -2.08
MISP3Q96FF7 SNORA44-201ENST00000384584 132 ntBASIC2.07□□□□□ -2.08
MISP3Q96FF7 MIR128-1-201ENST00000384921 82 ntBASIC2.07□□□□□ -2.08
MISP3Q96FF7 RNU6-360P-201ENST00000390944 104 ntBASIC2.07□□□□□ -2.08
MISP3Q96FF7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.07□□□□□ -2.08
MISP3Q96FF7 MIR6740-201ENST00000618268 113 ntBASIC2.07□□□□□ -2.08
MISP3Q96FF7 AL137790.1-201ENST00000634283 177 ntBASIC2.07□□□□□ -2.08
MISP3Q96FF7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
MISP3Q96FF7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
MISP3Q96FF7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
MISP3Q96FF7 Y_RNA.119-201ENST00000363301 96 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 MIR194-1-201ENST00000384892 85 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 MIR653-201ENST00000385279 96 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
MISP3Q96FF7 RNU6-205P-201ENST00000390858 107 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 SNORA48.2-201ENST00000390926 124 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 RNA5SP292-201ENST00000390974 118 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 SCARNA18B-201ENST00000458806 135 ntBASIC2.06□□□□□ -2.08
MISP3Q96FF7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms