Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RNU6-644P-201ENST00000391155 98 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 RNU6-322P-201ENST00000516010 103 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 RNA5SP458-201ENST00000516188 119 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 MIR6766-201ENST00000622641 72 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 RNU6-1313P-201ENST00000362622 102 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 SNORD115-35-201ENST00000365122 82 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 AL451046.2-201ENST00000403074 277 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 AC096949.1-201ENST00000412047 152 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 AL603825.1-201ENST00000438481 80 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 CYP3A52P-201ENST00000563326 91 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 MIR4777-201ENST00000583710 86 ntBASIC2.49□□□□□ -2.01
VTI1AQ96AJ9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 SNORA26.2-201ENST00000390922 122 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 AC009474.2-201ENST00000451383 136 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 RNU7-2P-201ENST00000516096 62 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 SNORD111.1-201ENST00000516421 86 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 MIR6132-201ENST00000622083 109 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 AL512310.12-203ENST00000640543 90 ntBASIC2.48□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.247-201ENST00000364500 92 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 MIR206-201ENST00000384872 86 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 HMGN2P23-201ENST00000456759 269 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 UBL5P1-201ENST00000507979 193 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 RNA5SP445-201ENST00000515889 115 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 RNU6-922P-201ENST00000516753 99 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 SNORA77B-201ENST00000578179 125 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 AC062037.1-201ENST00000605302 128 ntBASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VTI1AQ96AJ9 RNU6-60P-201ENST00000364792 103 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 SNORA48.3-201ENST00000391081 134 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 AC108729.3-201ENST00000513484 108 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 Y_RNA.659-201ENST00000515994 113 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 RNU7-79P-201ENST00000516082 62 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 RNU6-162P-201ENST00000516228 103 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 SNORD67.1-201ENST00000516618 108 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 MIR3198-2-201ENST00000577868 80 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 MIR3935-201ENST00000583472 104 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 MIR3192-201ENST00000584920 77 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 U7.3-201ENST00000616123 62 ntBASIC2.46□□□□□ -2.02
VTI1AQ96AJ9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VTI1AQ96AJ9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
VTI1AQ96AJ9 Y_RNA.95-201ENST00000363079 95 ntBASIC2.45□□□□□ -2.02
VTI1AQ96AJ9 RNU6-1086P-201ENST00000410930 100 ntBASIC2.45□□□□□ -2.02
VTI1AQ96AJ9 AC026421.1-201ENST00000519101 163 ntBASIC2.45□□□□□ -2.02
VTI1AQ96AJ9 AC015688.6-201ENST00000577737 104 ntBASIC2.45□□□□□ -2.02
VTI1AQ96AJ9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 SNORD45B-201ENST00000364617 72 ntBASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 Y_RNA.467-201ENST00000384297 102 ntBASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 RPL31P63-201ENST00000422565 375 ntBASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 RNU6-295P-201ENST00000516901 104 ntBASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 AL096861.1-201ENST00000610899 123 ntBASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VTI1AQ96AJ9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 SNORD38B-201ENST00000384690 67 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 RNU6-1237P-201ENST00000384777 107 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 AC104435.1-201ENST00000483483 166 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 RNA5SP200-201ENST00000516360 103 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 RNU6-1006P-201ENST00000516998 103 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 MIR376B-201ENST00000614515 100 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 SNORD38B-202ENST00000625943 69 ntBASIC2.43□□□□□ -2.02
VTI1AQ96AJ9 MIR34C-201ENST00000384831 77 ntBASIC2.42□□□□□ -2.02
VTI1AQ96AJ9 BTF3P4-201ENST00000418852 495 ntBASIC2.42□□□□□ -2.02
VTI1AQ96AJ9 RNU7-137P-201ENST00000516788 62 ntBASIC2.42□□□□□ -2.02
VTI1AQ96AJ9 AC105081.1-201ENST00000617727 106 ntBASIC2.42□□□□□ -2.02
VTI1AQ96AJ9 WWP1P1-201ENST00000466609 2769 ntBASIC2.42□□□□□ -2.02
VTI1AQ96AJ9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 Y_RNA.448-201ENST00000384185 108 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 MIR1302-7-201ENST00000408841 72 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 MRPL35P3-201ENST00000421557 364 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 AC244023.1-201ENST00000426884 112 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 AP000942.3-201ENST00000603702 160 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 AC242498.1-201ENST00000604134 111 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 PRELID3BP2-201ENST00000605362 201 ntBASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VTI1AQ96AJ9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
VTI1AQ96AJ9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 RNA5SP48-201ENST00000363969 126 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 RNU6-1134P-201ENST00000365156 101 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 RNU6-1321P-201ENST00000390905 107 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 snoU13.25-201ENST00000458945 104 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 RNU6-250P-201ENST00000516958 103 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 AC096720.1-201ENST00000604441 183 ntBASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.4□□□□□ -2.03
VTI1AQ96AJ9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms