Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 AC090574.1-201ENST00000623186 233 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 AC139792.2-201ENST00000624218 587 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 AL596211.1-201ENST00000569873 2277 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 MIR302B-201ENST00000362188 73 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-662P-201ENST00000384253 104 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 SNORA8.3-201ENST00000384679 139 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-535P-201ENST00000384722 107 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-269P-201ENST00000391077 97 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 MTND4P19-201ENST00000446659 478 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-507P-201ENST00000516045 100 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 AC138869.1-201ENST00000568623 124 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 MIR4802-201ENST00000581881 80 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 AL442067.1-201ENST00000613261 223 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 AC091932.4-201ENST00000623386 200 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 AC112487.2-201ENST00000637950 304 ntBASIC-0.2□□□□□ -2.44
LMX1AQ8TE12 MIR342-201ENST00000362212 99 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 RNU6-726P-201ENST00000364680 107 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 RNA5SP163-201ENST00000410304 99 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 RNU7-161P-201ENST00000517289 62 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 RNU2-60P-201ENST00000517290 128 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 MIR5197-201ENST00000583721 112 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 MIR548AD-201ENST00000584780 82 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 AC006006.1-201ENST00000603082 144 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 AC011921.3-201ENST00000605540 361 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 AL162376.1-201ENST00000624117 175 ntBASIC-0.21□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNA5SP98-201ENST00000363158 137 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNY1P13-201ENST00000365030 105 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 MIR215-201ENST00000384858 110 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNU6-823P-201ENST00000391042 103 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 MIR1252-201ENST00000408861 65 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 HMGN2P22-201ENST00000427588 175 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RPL39P25-201ENST00000449384 154 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 HAR1A.1-201ENST00000459583 118 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 RNU6-875P-201ENST00000516488 106 ntBASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.22□□□□□ -2.44
LMX1AQ8TE12 SNORA72.6-201ENST00000384520 129 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 SNORA53-201ENST00000391141 249 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 AC104692.1-201ENST00000472406 90 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 RNU6-180P-201ENST00000516697 61 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 AP003072.1-201ENST00000531740 145 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 MIR4677-201ENST00000584153 80 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 uc_338.28-201ENST00000612082 187 ntBASIC-0.23□□□□□ -2.45
LMX1AQ8TE12 MIR655-201ENST00000362159 97 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 SNORA25.1-201ENST00000362326 128 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 RNU6-702P-201ENST00000364982 107 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 RNU6-652P-201ENST00000365488 107 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 RNU6-211P-201ENST00000384047 107 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 RNU7-159P-201ENST00000459284 62 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 RNU6-531P-201ENST00000516694 104 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 MIR5706-201ENST00000579841 80 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 AL365205.2-201ENST00000594586 68 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 AC090971.5-201ENST00000621102 293 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 AC021613.1-201ENST00000623880 111 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 MTND5P32-201ENST00000560711 1802 ntBASIC-0.24□□□□□ -2.45
LMX1AQ8TE12 SNORA22.1-201ENST00000362701 134 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 SNORD42.2-201ENST00000365570 69 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 MT-TT-201ENST00000387460 66 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 AC244250.2-201ENST00000418731 148 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 U4.1-201ENST00000620349 87 ntBASIC-0.25□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 RNU6-770P-201ENST00000363929 105 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 RNY3P1-201ENST00000365085 102 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 RNU6-514P-201ENST00000384208 107 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms