Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
NUP43Q8NFH3 AP000648.3-201ENST00000623539 4507 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NUP43Q8NFH3 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.247-201ENST00000364500 92 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 SNORA16B-201ENST00000364674 135 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.467-201ENST00000384297 102 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 MIR513A1-201ENST00000385138 129 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 SNORD41-201ENST00000386967 70 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.593-201ENST00000410292 98 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 MRPL35P3-201ENST00000421557 364 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 RNA5SP458-201ENST00000516188 119 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2□□□□□ -2.09
NUP43Q8NFH3 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
NUP43Q8NFH3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
NUP43Q8NFH3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2□□□□□ -2.09
NUP43Q8NFH3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP43Q8NFH3 AL451046.2-201ENST00000403074 277 ntBASIC1.99□□□□□ -2.09
NUP43Q8NFH3 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
NUP43Q8NFH3 SNORD67.1-201ENST00000516618 108 ntBASIC1.99□□□□□ -2.09
NUP43Q8NFH3 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
NUP43Q8NFH3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NUP43Q8NFH3 MIR494-201ENST00000349529 81 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 RNY1P10-201ENST00000363268 113 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 RNA5SP173-201ENST00000364857 136 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 RNA5SP259-201ENST00000365541 109 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 RNU6-820P-201ENST00000384273 107 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 MIR764-201ENST00000390811 85 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 RNA5SP212-201ENST00000391223 107 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 MIR1289-2-201ENST00000408360 111 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
NUP43Q8NFH3 AC009474.2-201ENST00000451383 136 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 RNU7-79P-201ENST00000516082 62 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 SNORD111.1-201ENST00000516421 86 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 AC022254.1-201ENST00000567857 235 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 AC096720.1-201ENST00000604441 183 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 MIR376B-201ENST00000614515 100 ntBASIC1.98□□□□□ -2.09
NUP43Q8NFH3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NUP43Q8NFH3 MIR34C-201ENST00000384831 77 ntBASIC1.97□□□□□ -2.09
NUP43Q8NFH3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NUP43Q8NFH3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.97□□□□□ -2.09
NUP43Q8NFH3 RNU6-592P-201ENST00000411333 103 ntBASIC1.97□□□□□ -2.09
NUP43Q8NFH3 RNU7-137P-201ENST00000516788 62 ntBASIC1.97□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.97□□□□□ -2.09
NUP43Q8NFH3 AL353997.5-201ENST00000618886 171 ntBASIC1.97□□□□□ -2.09
NUP43Q8NFH3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUP43Q8NFH3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 RNU6-1152P-201ENST00000384576 107 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 RNU6-887P-201ENST00000410660 100 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 RPL31P63-201ENST00000422565 375 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NUP43Q8NFH3 MIR4439-201ENST00000583746 80 ntBASIC1.96□□□□□ -2.1
NUP43Q8NFH3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RNA5SP48-201ENST00000363969 126 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 SNORD38B-201ENST00000384690 67 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 AC109327.2-201ENST00000448339 378 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RNA5SP445-201ENST00000515889 115 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RNU6-922P-201ENST00000516753 99 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 AC015688.6-201ENST00000577737 104 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 MIR3192-201ENST00000584920 77 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NUP43Q8NFH3 SNORD38B-202ENST00000625943 69 ntBASIC1.95□□□□□ -2.1
NUP43Q8NFH3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NUP43Q8NFH3 SNORD114-10-201ENST00000363409 72 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 SNORD38.1-201ENST00000363863 68 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 RNY1P13-201ENST00000365030 105 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 RNU6-573P-201ENST00000383938 106 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 RNU6-972P-201ENST00000391208 107 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 AC090255.1-201ENST00000495779 349 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 AL096861.1-201ENST00000610899 123 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 AC105081.1-201ENST00000617727 106 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 SEPT14P17-201ENST00000617978 177 ntBASIC1.94□□□□□ -2.1
NUP43Q8NFH3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms