Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR4282-201ENST00000583613 67 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 MIR3171-201ENST00000584270 74 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 AL365205.2-201ENST00000594586 68 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 AL596211.1-201ENST00000569873 2277 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 SEPT7P4-201ENST00000437076 306 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 SUMO1P3-201ENST00000439961 304 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 RNU6-469P-201ENST00000516253 101 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 MTND5P34-201ENST00000568888 325 ntBASIC-0.01□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 RNY1P13-201ENST00000365030 105 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 SNORD28-201ENST00000384706 75 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 RNU6-570P-201ENST00000517051 105 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 MIR3152-201ENST00000579801 74 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 AL365265.1-201ENST00000621045 234 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 AC021613.1-201ENST00000623880 111 ntBASIC-0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 MIR489-201ENST00000384923 84 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 RNU4-43P-201ENST00000410628 137 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 SNORA25.16-201ENST00000516741 121 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 SCARNA15-202ENST00000516881 127 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 AL442663.2-201ENST00000554385 511 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
CCDC65Q8IXS2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 SNORA22.1-201ENST00000362701 134 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 RNU6-985P-201ENST00000410182 104 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 RNU1-29P-201ENST00000606574 126 ntBASIC-0.04□□□□□ -2.42
CCDC65Q8IXS2 SNORA9.1-201ENST00000362412 131 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 RNU6-978P-201ENST00000364371 103 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 SNORA18-201ENST00000384416 132 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 RPL39P25-201ENST00000449384 154 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 RNU6-135P-201ENST00000516769 101 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 MIR1273G-201ENST00000577677 100 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 MIR4639-201ENST00000584938 69 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 U2.14-201ENST00000615943 113 ntBASIC-0.05□□□□□ -2.42
CCDC65Q8IXS2 RNA5SP245-201ENST00000364239 121 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 SNORA2A-201ENST00000383885 135 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 RNU6-535P-201ENST00000384722 107 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 MIR548H2-201ENST00000408874 88 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 AC113618.1-201ENST00000416747 285 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 TRBVB-201ENST00000477100 408 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 RNU6-848P-201ENST00000515948 107 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 RNU6-617P-201ENST00000516147 107 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 RNU6-473P-201ENST00000516164 107 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 AC011921.3-201ENST00000605540 361 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 AC244669.1-204ENST00000621564 178 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 AC091304.10-201ENST00000641554 121 ntBASIC-0.06□□□□□ -2.42
CCDC65Q8IXS2 RNU6-728P-201ENST00000365375 104 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 SNORA72.6-201ENST00000384520 129 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.07□□□□□ -2.42
CCDC65Q8IXS2 MTND5P32-201ENST00000560711 1802 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 MIR335-201ENST00000362173 94 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 SNORA20-201ENST00000384662 132 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 MTCYBP6-201ENST00000441810 138 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 MIR4643-201ENST00000577473 78 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 MIR371B-201ENST00000638082 66 ntBASIC-0.08□□□□□ -2.42
CCDC65Q8IXS2 MIR330-201ENST00000362196 94 ntBASIC-0.09□□□□□ -2.42
CCDC65Q8IXS2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CCDC65Q8IXS2 AL117351.2-201ENST00000513571 157 ntBASIC-0.09□□□□□ -2.42
CCDC65Q8IXS2 MIR4752-201ENST00000579672 72 ntBASIC-0.09□□□□□ -2.42
CCDC65Q8IXS2 MIR8087-201ENST00000612745 78 ntBASIC-0.09□□□□□ -2.42
CCDC65Q8IXS2 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 SNORD114-5-201ENST00000362928 70 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 SNORA33.2-201ENST00000365413 134 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms