Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC109327.2-201ENST00000448339 378 ntBASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 AC009474.2-201ENST00000451383 136 ntBASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 RNU7-48P-201ENST00000458875 63 ntBASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 SNORA59A-201ENST00000459326 152 ntBASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 AC121758.2-201ENST00000553271 193 ntBASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 AP001362.1-201ENST00000625165 124 ntBASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
UBE3DQ7Z6J8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 MIR34C-201ENST00000384831 77 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 RNU6-1321P-201ENST00000390905 107 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 MIR548G-201ENST00000408442 89 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 HSPE1P24-201ENST00000450782 238 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 AC104435.1-201ENST00000483483 166 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 AC015688.6-201ENST00000577737 104 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 RNU6-90P-201ENST00000606352 106 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 AL662814.1-201ENST00000617364 121 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 MIR3202-2-201ENST00000635980 79 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 MIR1245B-201ENST00000636115 69 ntBASIC2.09□□□□□ -2.07
UBE3DQ7Z6J8 WWP1P1-201ENST00000466609 2769 ntBASIC2.09□□□□□ -2.08
UBE3DQ7Z6J8 Y_RNA.247-201ENST00000364500 92 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-1163P-201ENST00000364516 107 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 RNY1P13-201ENST00000365030 105 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-242P-201ENST00000384359 107 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-1307P-201ENST00000391012 103 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 AC141846.1-201ENST00000568348 142 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 MIR4713-201ENST00000582691 75 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 GHRLOS.1-201ENST00000610995 70 ntBASIC2.08□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-1244P-201ENST00000363614 108 ntBASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 MIR23A-201ENST00000385245 73 ntBASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 MT-TN-201ENST00000387400 73 ntBASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 SNORD53-201ENST00000579969 78 ntBASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
UBE3DQ7Z6J8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-949P-201ENST00000384040 107 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 SNORD78.1-201ENST00000390866 65 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 snoU13.2-201ENST00000459201 104 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-638P-201ENST00000516582 104 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 AC133485.1-201ENST00000567176 124 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 MIR4264-201ENST00000583520 66 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 MIR8074-201ENST00000615081 81 ntBASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
UBE3DQ7Z6J8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 HSBP1P2-201ENST00000299671 229 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 Y_RNA.190-201ENST00000363964 101 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-396P-201ENST00000365369 105 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 SNORA6-201ENST00000384033 151 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 Y_RNA.567-201ENST00000384736 106 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-592P-201ENST00000411333 103 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 AC022137.1-201ENST00000483735 151 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-922P-201ENST00000516753 99 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 RNU11-2P-201ENST00000516898 142 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 SNORA77B-201ENST00000578179 125 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 AC103810.7-201ENST00000607821 91 ntBASIC2.05□□□□□ -2.08
UBE3DQ7Z6J8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-1125P-201ENST00000363601 107 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 Y_RNA.173-201ENST00000363776 113 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNY1P2-201ENST00000364820 117 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-573P-201ENST00000383938 106 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-480P-201ENST00000384332 107 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 MIR563-201ENST00000385080 79 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RPL39P39-201ENST00000455840 151 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 MIR2115-201ENST00000516657 100 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 MIR4668-201ENST00000582284 70 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-86P-201ENST00000606534 107 ntBASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-219P-201ENST00000364728 107 ntBASIC2.03□□□□□ -2.08
UBE3DQ7Z6J8 RNU6-402P-201ENST00000410678 103 ntBASIC2.03□□□□□ -2.08
UBE3DQ7Z6J8 Y_RNA.620-201ENST00000411009 88 ntBASIC2.03□□□□□ -2.08
UBE3DQ7Z6J8 AP000753.3-201ENST00000604083 169 ntBASIC2.03□□□□□ -2.08
UBE3DQ7Z6J8 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
UBE3DQ7Z6J8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 MIR377-201ENST00000362145 69 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 MIRLET7G-201ENST00000362280 84 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 SNORD33-201ENST00000362761 85 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 RNU6-301P-201ENST00000384277 107 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 RNU6-1237P-201ENST00000384777 107 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 SPINT5P-201ENST00000448174 155 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 RPL23AP94-201ENST00000512518 302 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms