Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RNU6-602P-201ENST00000411155 105 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 AL603825.1-201ENST00000438481 80 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-871P-201ENST00000516122 100 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 MIR8065-201ENST00000620577 100 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
SH3RF1Q7Z6J0 RNA5SP138-201ENST00000365098 114 ntBASIC2.93□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-1321P-201ENST00000390905 107 ntBASIC2.93□□□□□ -1.94
SH3RF1Q7Z6J0 RNU4-53P-201ENST00000410828 140 ntBASIC2.93□□□□□ -1.94
SH3RF1Q7Z6J0 AL591806.2-201ENST00000433122 173 ntBASIC2.93□□□□□ -1.94
SH3RF1Q7Z6J0 Z97988.1-201ENST00000637697 135 ntBASIC2.93□□□□□ -1.94
SH3RF1Q7Z6J0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-686P-201ENST00000364839 107 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 Y_RNA.386-201ENST00000383913 105 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 MIR518A2-201ENST00000384966 87 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 RNA5SP210-201ENST00000391034 120 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 RNU7-48P-201ENST00000458875 63 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 SNORD4B-201ENST00000459083 72 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 RNA5SP320-201ENST00000516263 124 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-1015P-201ENST00000517121 99 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 MIR4648-201ENST00000580107 72 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 AC105081.1-201ENST00000617727 106 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 AC008133.2-201ENST00000624540 351 ntBASIC2.92□□□□□ -1.94
SH3RF1Q7Z6J0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SH3RF1Q7Z6J0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.91□□□□□ -1.94
SH3RF1Q7Z6J0 MIR424-201ENST00000362227 98 ntBASIC2.91□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-112P-201ENST00000363599 104 ntBASIC2.91□□□□□ -1.94
SH3RF1Q7Z6J0 SUB1P4-201ENST00000566062 339 ntBASIC2.91□□□□□ -1.94
SH3RF1Q7Z6J0 SNORA63.2-201ENST00000362603 126 ntBASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 RN7SKP223-201ENST00000410582 62 ntBASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 AC099513.1-201ENST00000490423 301 ntBASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 RNU7-137P-201ENST00000516788 62 ntBASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 MIR4764-201ENST00000580680 88 ntBASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 SNORD14A-201ENST00000606526 91 ntBASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SH3RF1Q7Z6J0 RNA5SP99-201ENST00000364020 114 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-296P-201ENST00000384608 107 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-380P-201ENST00000410207 107 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 RNA5SP425-201ENST00000410336 112 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 snoU13.11-201ENST00000459219 104 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 AC108210.2-201ENST00000503681 201 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 AP001362.1-201ENST00000625165 124 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 MAPK10-266ENST00000641066 6555 ntBASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
SH3RF1Q7Z6J0 RNU1-51P-201ENST00000365345 176 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 SNORD38B-201ENST00000384690 67 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-1237P-201ENST00000384777 107 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 MIR520C-201ENST00000385005 87 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 RNA5SP237-201ENST00000410414 113 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 DEFB122-202ENST00000569013 197 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 MIR5092-201ENST00000583139 88 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 U1.36-201ENST00000620684 176 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 SNORD38B-202ENST00000625943 69 ntBASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.88□□□□□ -1.95
SH3RF1Q7Z6J0 RNA5SP501-201ENST00000410990 112 ntBASIC2.87□□□□□ -1.95
SH3RF1Q7Z6J0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.87□□□□□ -1.95
SH3RF1Q7Z6J0 AC133485.1-201ENST00000567176 124 ntBASIC2.87□□□□□ -1.95
SH3RF1Q7Z6J0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SH3RF1Q7Z6J0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 HSBP1P2-201ENST00000299671 229 ntBASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 Y_RNA.532-201ENST00000384590 113 ntBASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 HMGN2P39-201ENST00000398005 273 ntBASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-634P-201ENST00000459134 106 ntBASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 Y_RNA.660-201ENST00000516002 120 ntBASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-448P-201ENST00000517052 107 ntBASIC2.86□□□□□ -1.95
SH3RF1Q7Z6J0 Y_RNA.205-201ENST00000364128 113 ntBASIC2.85□□□□□ -1.95
SH3RF1Q7Z6J0 MIR27B-201ENST00000385129 97 ntBASIC2.85□□□□□ -1.95
SH3RF1Q7Z6J0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.85□□□□□ -1.95
SH3RF1Q7Z6J0 Y_RNA.676-201ENST00000516393 96 ntBASIC2.85□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-687P-201ENST00000516443 89 ntBASIC2.85□□□□□ -1.95
SH3RF1Q7Z6J0 AC010297.1-201ENST00000623948 149 ntBASIC2.85□□□□□ -1.95
SH3RF1Q7Z6J0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 RNU6-987P-201ENST00000384759 104 ntBASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 RNU7-85P-201ENST00000458851 63 ntBASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 MIR4658-201ENST00000584344 65 ntBASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 U4.3-201ENST00000621047 82 ntBASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SH3RF1Q7Z6J0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 MIR6073-201ENST00000352083 89 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 RNA5SP456-201ENST00000364002 114 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 U8.9-201ENST00000365667 134 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 Y_RNA.508-201ENST00000384502 114 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-482P-201ENST00000391068 107 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 RNU2-59P-201ENST00000410482 191 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 FGF7P7-201ENST00000514120 227 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-548P-201ENST00000517083 115 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 MIR3935-201ENST00000583472 104 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms