Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNU4-62P-201ENST00000410125 130 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 JTBP1-201ENST00000441314 247 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 MIR8081-201ENST00000611533 95 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 MIR2052-201ENST00000636055 55 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.10-201ENST00000362371 110 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 RNY3P2-201ENST00000362918 102 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-439P-201ENST00000384188 106 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-616P-201ENST00000384353 107 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 SNORA7.5-201ENST00000410672 110 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 AP1B1P2-201ENST00000416196 106 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 AC245047.7-201ENST00000440265 293 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 SNORA72.7-201ENST00000516349 94 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 SNORD111.1-201ENST00000516421 86 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 AL359821.1-201ENST00000605519 182 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 MIR4251-201ENST00000635819 61 ntBASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-1131P-201ENST00000364955 107 ntBASIC2.33□□□□□ -2.04
PRPF40BQ6NWY9 Y_RNA.360-201ENST00000365512 102 ntBASIC2.33□□□□□ -2.04
PRPF40BQ6NWY9 MIR194-1-201ENST00000384892 85 ntBASIC2.33□□□□□ -2.04
PRPF40BQ6NWY9 MIR7-2-201ENST00000384970 110 ntBASIC2.33□□□□□ -2.04
PRPF40BQ6NWY9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF40BQ6NWY9 SNORA25.9-201ENST00000365087 128 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 MIR518E-201ENST00000385252 88 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 RPS29P11-201ENST00000496507 171 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 SCARNA23-201ENST00000516060 130 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-250P-201ENST00000516958 103 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 MIR4694-201ENST00000578534 80 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.32□□□□□ -2.04
PRPF40BQ6NWY9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRPF40BQ6NWY9 AC022254.1-201ENST00000567857 235 ntBASIC2.31□□□□□ -2.04
PRPF40BQ6NWY9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.31□□□□□ -2.04
PRPF40BQ6NWY9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.31□□□□□ -2.04
PRPF40BQ6NWY9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PRPF40BQ6NWY9 Y_RNA.93-201ENST00000363066 109 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 RNY1P10-201ENST00000363268 113 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 Y_RNA.220-201ENST00000364244 109 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 MIR653-201ENST00000385279 96 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-922P-201ENST00000516753 99 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-158P-201ENST00000517104 100 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 MIR4303-201ENST00000581299 66 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 MIR3935-201ENST00000583472 104 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 MIR8055-201ENST00000610739 97 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 Z97988.1-201ENST00000637697 135 ntBASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-1099P-201ENST00000363533 107 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 RNA5SP48-201ENST00000363969 126 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 SNORA18-201ENST00000384416 132 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 MIR605-201ENST00000385078 83 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 Y_RNA.601-201ENST00000410500 113 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 MTATP8P2-201ENST00000435212 202 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 TRMT112P2-201ENST00000512910 132 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 RNU7-41P-201ENST00000515917 61 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 MIR548AO-201ENST00000579992 96 ntBASIC2.29□□□□□ -2.04
PRPF40BQ6NWY9 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-832P-201ENST00000363319 107 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-294P-201ENST00000364999 102 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 MIR577-201ENST00000385196 96 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 AL161935.2-201ENST00000414627 60 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 snoU13.18-201ENST00000459483 104 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 RNU6-521P-201ENST00000516663 105 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 MIR4299-201ENST00000577899 72 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 AL357312.1-201ENST00000603879 298 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 AL512310.12-203ENST00000640543 90 ntBASIC2.28□□□□□ -2.04
PRPF40BQ6NWY9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-342P-201ENST00000384521 104 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 SNORD38B-201ENST00000384690 67 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-602P-201ENST00000411155 105 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 MIR1270-201ENST00000459320 83 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 MIR8074-201ENST00000615081 81 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 MIR8065-201ENST00000620577 100 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 SNORD38B-202ENST00000625943 69 ntBASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-679P-201ENST00000391003 106 ntBASIC2.26□□□□□ -2.05
PRPF40BQ6NWY9 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-1086P-201ENST00000410930 100 ntBASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 Y_RNA.659-201ENST00000515994 113 ntBASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 AC096720.1-201ENST00000604441 183 ntBASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.25□□□□□ -2.05
PRPF40BQ6NWY9 SNORD45B-201ENST00000364617 72 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 MIR488-201ENST00000365739 83 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-49P-201ENST00000384256 107 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms