Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 RNA5SP259-201ENST00000365541 109 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 MIR513A1-201ENST00000385138 129 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 SNORD41-201ENST00000386967 70 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 SNRPGP12-201ENST00000449481 213 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 SNORD4B-201ENST00000459083 72 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 AC138749.4-201ENST00000563970 127 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 MIR622-201ENST00000638396 96 ntBASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDPF1Q6NVV7 RNU6-315P-201ENST00000362666 107 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 MIR588-201ENST00000384900 83 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 RNU4-83P-201ENST00000410863 133 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 AL139132.1-201ENST00000431587 344 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 JTBP1-201ENST00000441314 247 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 RNU2-19P-201ENST00000517288 84 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 MIR4500-201ENST00000579472 76 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 MIR3605-201ENST00000583214 100 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 AP000942.3-201ENST00000603702 160 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 AL357312.1-201ENST00000603879 298 ntBASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDPF1Q6NVV7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 Y_RNA.57-201ENST00000362806 113 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 RNU6-571P-201ENST00000384128 107 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 MIR1302-7-201ENST00000408841 72 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 AC139453.2-201ENST00000487255 133 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 SNORA25.13-201ENST00000516395 103 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 RNU7-153P-201ENST00000516455 62 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 EIF4BP1-201ENST00000554881 351 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 MIR2682-201ENST00000580305 110 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 MIR3192-201ENST00000584920 77 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 AC067747.1-201ENST00000608026 250 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 MIR7106-201ENST00000612419 65 ntBASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDPF1Q6NVV7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 RNU6-396P-201ENST00000365369 105 ntBASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 SNORA7.4-201ENST00000384249 137 ntBASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 RNU6-850P-201ENST00000516934 103 ntBASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 SNORA4-201ENST00000584302 138 ntBASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CDPF1Q6NVV7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 RNU6-129P-201ENST00000391022 107 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 RNA5SP212-201ENST00000391223 107 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 SNORA9.3-201ENST00000516383 129 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 MIR4264-201ENST00000583520 66 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 AC145423.2-201ENST00000610631 239 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 AL096861.1-201ENST00000610899 123 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 MIR6895-201ENST00000613497 78 ntBASIC2.09□□□□□ -2.07
CDPF1Q6NVV7 AC008163.1-202ENST00000636004 2889 ntBASIC2.09□□□□□ -2.08
CDPF1Q6NVV7 MIR30D-201ENST00000362283 70 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 RNU6-624P-201ENST00000363411 107 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 SNORD15B-201ENST00000384714 146 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 MIR889-201ENST00000401280 79 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 Y_RNA.648-201ENST00000459455 110 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 RNU6-922P-201ENST00000516753 99 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 GTF3AP2-201ENST00000557014 266 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 MIR4298-201ENST00000584380 73 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 MIR6740-201ENST00000618268 113 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 AC006386.2-201ENST00000624491 75 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 AC012005.1-201ENST00000624575 75 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 U6.109-201ENST00000636749 87 ntBASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.08□□□□□ -2.08
CDPF1Q6NVV7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 Y_RNA.119-201ENST00000363301 96 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 RNU4-32P-201ENST00000363404 141 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 RNU6-1229P-201ENST00000364295 107 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 SNORA71.1-201ENST00000364523 117 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 RNU6-851P-201ENST00000384565 107 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 MIR512-1-201ENST00000384913 84 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 MT-TN-201ENST00000387400 73 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 SNORD67-201ENST00000390833 111 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 HSPE1P24-201ENST00000450782 238 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 RNU7-85P-201ENST00000458851 63 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDPF1Q6NVV7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
CDPF1Q6NVV7 UBE2DNL-203ENST00000474922 222 ntBASIC2.06□□□□□ -2.08
CDPF1Q6NVV7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.06□□□□□ -2.08
CDPF1Q6NVV7 U7.4-201ENST00000614961 63 ntBASIC2.06□□□□□ -2.08
CDPF1Q6NVV7 MIR6852-201ENST00000621699 66 ntBASIC2.06□□□□□ -2.08
CDPF1Q6NVV7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDPF1Q6NVV7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms