Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 RNA5SP148-201ENST00000516527 94 ntBASIC2.65□□□□□ -1.99
MCCD1P59942 SCARNA15.3-201ENST00000626315 122 ntBASIC2.65□□□□□ -1.99
MCCD1P59942 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MCCD1P59942 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
MCCD1P59942 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.64□□□□□ -1.99
MCCD1P59942 AC012676.2-201ENST00000619258 186 ntBASIC2.64□□□□□ -1.99
MCCD1P59942 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
MCCD1P59942 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MCCD1P59942 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
MCCD1P59942 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
MCCD1P59942 MIR653-201ENST00000385279 96 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 MIR676-201ENST00000390702 67 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 RNA5SP212-201ENST00000391223 107 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 AL356379.1-201ENST00000414105 126 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 HMGN2P19-201ENST00000425149 265 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.63□□□□□ -1.99
MCCD1P59942 AC133485.1-201ENST00000567176 124 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 AC141846.1-201ENST00000568348 142 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 MIR4672-201ENST00000583126 81 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.63□□□□□ -1.99
MCCD1P59942 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
MCCD1P59942 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MCCD1P59942 SNORA25.3-201ENST00000363205 127 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-979P-201ENST00000383896 107 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 SNORD38.2-201ENST00000384470 69 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-447P-201ENST00000410293 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-1118P-201ENST00000410382 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-1076P-201ENST00000410397 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-355P-201ENST00000410427 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-791P-201ENST00000410467 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-705P-201ENST00000410601 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-1100P-201ENST00000410691 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-860P-201ENST00000410860 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-1217P-201ENST00000411276 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 RNU6-785P-201ENST00000411324 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 MIR5007-201ENST00000583098 95 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 U6.90-201ENST00000614007 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 AL773524.1-201ENST00000614065 229 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 U6.70-201ENST00000620287 104 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MCCD1P59942 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MCCD1P59942 AL365361.1-201ENST00000566942 3481 ntBASIC2.62□□□□□ -1.99
MCCD1P59942 AL161722.3-201ENST00000605789 2983 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
MCCD1P59942 Y_RNA.4-201ENST00000362333 112 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 Y_RNA.313-201ENST00000365095 103 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 JTBP1-201ENST00000441314 247 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 MIR4299-201ENST00000577899 72 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 MIR3192-201ENST00000584920 77 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 PRELID3BP2-201ENST00000605362 201 ntBASIC2.61□□□□□ -1.99
MCCD1P59942 AL359851.1-201ENST00000569460 4997 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
MCCD1P59942 RNU6-1125P-201ENST00000363601 107 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 RNU6-1244P-201ENST00000363614 108 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 SNORA5B-201ENST00000363786 132 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 MIR181B2-201ENST00000385004 89 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 AC244636.1-201ENST00000421152 228 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 AC244023.1-201ENST00000426884 112 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 AC242498.1-201ENST00000604134 111 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 AP001362.1-201ENST00000625165 124 ntBASIC2.6□□□□□ -1.99
MCCD1P59942 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
MCCD1P59942 RNU6-787P-201ENST00000384032 107 ntBASIC2.59□□□□□ -1.99
MCCD1P59942 Y_RNA.426-201ENST00000384068 113 ntBASIC2.59□□□□□ -1.99
MCCD1P59942 MIR196B-201ENST00000384852 84 ntBASIC2.59□□□□□ -1.99
MCCD1P59942 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
MCCD1P59942 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
MCCD1P59942 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.59□□□□□ -1.99
MCCD1P59942 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.59□□□□□ -2
MCCD1P59942 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
MCCD1P59942 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
MCCD1P59942 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.58□□□□□ -2
MCCD1P59942 SNORD41-201ENST00000386967 70 ntBASIC2.58□□□□□ -2
MCCD1P59942 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.58□□□□□ -2
MCCD1P59942 AL662814.1-201ENST00000617364 121 ntBASIC2.58□□□□□ -2
MCCD1P59942 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
MCCD1P59942 MIR588-201ENST00000384900 83 ntBASIC2.57□□□□□ -2
MCCD1P59942 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
MCCD1P59942 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.57□□□□□ -2
MCCD1P59942 MIR548BB-201ENST00000626714 66 ntBASIC2.57□□□□□ -2
MCCD1P59942 RNA5SP48-201ENST00000363969 126 ntBASIC2.56□□□□□ -2
MCCD1P59942 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
MCCD1P59942 AL513043.2-201ENST00000573941 143 ntBASIC2.56□□□□□ -2
MCCD1P59942 MIR4500-201ENST00000579472 76 ntBASIC2.56□□□□□ -2
MCCD1P59942 AC020891.4-201ENST00000605745 93 ntBASIC2.56□□□□□ -2
MCCD1P59942 AL096861.1-201ENST00000610899 123 ntBASIC2.56□□□□□ -2
MCCD1P59942 RNU6-509P-201ENST00000363519 107 ntBASIC2.55□□□□□ -2
MCCD1P59942 Y_RNA.173-201ENST00000363776 113 ntBASIC2.55□□□□□ -2
MCCD1P59942 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.55□□□□□ -2
MCCD1P59942 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
MCCD1P59942 RPL23AP42-201ENST00000471152 471 ntBASIC2.55□□□□□ -2
MCCD1P59942 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
MCCD1P59942 AL096840.1-201ENST00000603287 93 ntBASIC2.55□□□□□ -2
MCCD1P59942 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
MCCD1P59942 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.55□□□□□ -2
MCCD1P59942 AC025521.1-201ENST00000621624 286 ntBASIC2.55□□□□□ -2
MCCD1P59942 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
MCCD1P59942 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MCCD1P59942 RNU6-480P-201ENST00000384332 107 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms